RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	MDY2	Q12285	212 aa		2.73	□□□□□ -1.97
VMA10	YHR039C-A	YCR024C-B	Q3E7Z8	88 aa		2.73	□□□□□ -1.97
VMA10	YHR039C-A	PIS1	P06197	220 aa	Known RBP	2.72	□□□□□ -1.97
VMA10	YHR039C-A	RNR2	P09938	399 aa	Known RBP	2.72	□□□□□ -1.97
VMA10	YHR039C-A	GAL3	P13045	520 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	CBS2	P14905	389 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	FAR1	P21268	830 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	NAM9	P27929	486 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	POP5	P28005	173 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	ARO2	P28777	376 aa	Known RBP	2.72	□□□□□ -1.97
VMA10	YHR039C-A	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
VMA10	YHR039C-A	AVT5	P38176	459 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	NDT80	P38830	627 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	SEC9	P40357	651 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	SEC27	P41811	889 aa	Known RBP	2.72	□□□□□ -1.97
VMA10	YHR039C-A	LCB3	P47013	409 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	YJR085C	P47131	105 aa	Known RBP	2.72	□□□□□ -1.97
VMA10	YHR039C-A	YGL114W	P53134	725 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	MTQ1	P53944	314 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	SMP3	Q04174	516 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	ARR1	Q06596	294 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	MRPL35	Q06678	367 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	SHS1	Q07657	551 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	SMC5	Q08204	1093 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	FDH1	Q08911	376 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	TMS1	Q12116	473 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	GLE1	Q12315	538 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	EAF3	Q12432	401 aa		2.72	□□□□□ -1.97
VMA10	YHR039C-A	VPS63	O13549	108 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	CBP2	P03874	630 aa	Predicted RBP	2.71	□□□□□ -1.98
VMA10	YHR039C-A	CDC37	P06101	506 aa	Known RBP	2.71	□□□□□ -1.98
VMA10	YHR039C-A	MSI1	P13712	422 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	DAL2	P25335	343 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	MXR2	P25566	168 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	DEG1	P31115	442 aa	Known RBP	2.71	□□□□□ -1.98
VMA10	YHR039C-A	RAD5	P32849	1169 aa	Predicted RBP	2.71	□□□□□ -1.98
VMA10	YHR039C-A	MRPS5	P33759	307 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	YOX1	P34161	385 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	PRP39	P39682	629 aa	Known RBP	2.71	□□□□□ -1.98
VMA10	YHR039C-A	SSO2	P39926	295 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	YMR134W	P40207	237 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	PAN6	P40459	309 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	AIM24	P47127	394 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	GPI8	P49018	411 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	YNL146W	P53906	100 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	PRM6	Q04705	352 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	MSC3	Q05812	728 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	HRI1	Q05905	244 aa	Known RBP	2.71	□□□□□ -1.98
VMA10	YHR039C-A	RSA1	Q08932	381 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	YDR262W	Q12331	272 aa		2.71	□□□□□ -1.98
VMA10	YHR039C-A	MEX67	Q99257	599 aa	Known RBP	2.71	□□□□□ -1.98
VMA10	YHR039C-A	PET18	P25362	215 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	SSE1	P32589	693 aa	Known RBP	2.7	□□□□□ -1.98
VMA10	YHR039C-A	CSE2	P33308	149 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	PEX32	P38292	413 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	ATG7	P38862	630 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	PCL7	P40186	285 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	AIM20	P40451	204 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	MAM33	P40513	266 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	YPI1	P43587	155 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	MST27	P53176	234 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	NAT4	Q04751	285 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	YLH47	Q06493	454 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	YDL114W	Q07530	308 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	FCY22	Q12119	530 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	SPO24	Q3E752	67 aa		2.7	□□□□□ -1.98
VMA10	YHR039C-A	DET1	Q99288	334 aa	Known RBP	2.7	□□□□□ -1.98
VMA10	YHR039C-A	SUP35	P05453	685 aa	Known RBP	2.69	□□□□□ -1.98
VMA10	YHR039C-A	YLL053C	P0CD98	152 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	GCD2	P12754	651 aa	Predicted RBP	2.69	□□□□□ -1.98
VMA10	YHR039C-A	DAL5	P15365	543 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	PET123	P17558	318 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	RPB5	P20434	215 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	UTR1	P21373	530 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	FUN26	P31381	517 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	SPO23	P33757	523 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	IST2	P38250	946 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	YHR131C	P38835	850 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	PTI1	P39927	425 aa	Predicted RBP	2.69	□□□□□ -1.98
VMA10	YHR039C-A	HAC1	P41546	238 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	YGR210C	P42942	411 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	CTK3	P46963	296 aa	Predicted RBP	2.69	□□□□□ -1.98
VMA10	YHR039C-A	LST7	P53237	242 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	RTN1	Q04947	295 aa	Known RBP	2.69	□□□□□ -1.98
VMA10	YHR039C-A	RIF2	Q06208	395 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	CUR1	Q06469	252 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	YPR091C	Q06833	770 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	YOL075C	Q08234	1294 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	APC5	Q08683	685 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	PCL9	Q12477	304 aa		2.69	□□□□□ -1.98
VMA10	YHR039C-A	RAD1	P06777	1100 aa		2.68	□□□□□ -1.98
VMA10	YHR039C-A	NAM2	P11325	894 aa		2.68	□□□□□ -1.98
VMA10	YHR039C-A	ARF2	P19146	181 aa	Known RBP	2.68	□□□□□ -1.98
VMA10	YHR039C-A	DBP3	P20447	523 aa	Known RBP	2.68	□□□□□ -1.98
VMA10	YHR039C-A	CHA1	P25379	360 aa	Known RBP	2.68	□□□□□ -1.98
VMA10	YHR039C-A	CIN8	P27895	1000 aa		2.68	□□□□□ -1.98
VMA10	YHR039C-A	ANR2	P36090	516 aa	Predicted RBP	2.68	□□□□□ -1.98
VMA10	YHR039C-A	ECM8	P38246	354 aa		2.68	□□□□□ -1.98
VMA10	YHR039C-A	RTC2	P38279	296 aa		2.68	□□□□□ -1.98
VMA10	YHR039C-A	MNN9	P39107	395 aa	Known RBP	2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms