RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C RAD30Q04049 632 aa6.55□□□□□ -1.36
PUP2YGR253C SNX41Q04053 625 aa6.55□□□□□ -1.36
PUP2YGR253C ARR1Q06596 294 aa6.55□□□□□ -1.36
PUP2YGR253C RSA1Q08932 381 aa6.55□□□□□ -1.36
PUP2YGR253C YDL211CQ12121 372 aa6.55□□□□□ -1.36
PUP2YGR253C PFK27Q12471 397 aaPredicted RBP6.55□□□□□ -1.36
PUP2YGR253C STE6P12866 1290 aa6.54□□□□□ -1.36
PUP2YGR253C PDA1P16387 420 aaKnown RBP6.54□□□□□ -1.36
PUP2YGR253C MDH2P22133 377 aa6.54□□□□□ -1.36
PUP2YGR253C ATG14P38270 344 aa6.54□□□□□ -1.36
PUP2YGR253C GAT2P40209 560 aa6.54□□□□□ -1.36
PUP2YGR253C QDR2P40474 542 aa6.54□□□□□ -1.36
PUP2YGR253C MSY1P48527 492 aa6.54□□□□□ -1.36
PUP2YGR253C IMA1P53051 589 aa6.54□□□□□ -1.36
PUP2YGR253C OGG1P53397 376 aaPredicted RBP6.54□□□□□ -1.36
PUP2YGR253C MOT3P54785 490 aaKnown RBP6.54□□□□□ -1.36
PUP2YGR253C EMG1Q06287 252 aaKnown RBP6.54□□□□□ -1.36
PUP2YGR253C HNT3Q08702 217 aa6.54□□□□□ -1.36
PUP2YGR253C RPN6Q12377 434 aa6.54□□□□□ -1.36
PUP2YGR253C NPC2Q12408 173 aa6.54□□□□□ -1.36
PUP2YGR253C PHO81P17442 1178 aa6.53□□□□□ -1.36
PUP2YGR253C NPP1P25353 742 aa6.53□□□□□ -1.36
PUP2YGR253C PHO91P27514 894 aa6.53□□□□□ -1.36
PUP2YGR253C MRPL17P36528 281 aa6.53□□□□□ -1.36
PUP2YGR253C RGI1P40043 161 aaPredicted RBP6.53□□□□□ -1.36
PUP2YGR253C SOK2P53438 785 aaPredicted RBP6.53□□□□□ -1.36
PUP2YGR253C DCP2P53550 970 aaKnown RBP6.53□□□□□ -1.36
PUP2YGR253C EKI1Q03764 534 aa6.53□□□□□ -1.36
PUP2YGR253C URC2Q04411 772 aa6.53□□□□□ -1.36
PUP2YGR253C YKU80Q04437 629 aa6.53□□□□□ -1.36
PUP2YGR253C SFH1Q06168 426 aa6.53□□□□□ -1.36
PUP2YGR253C CAR2P07991 424 aaKnown RBP6.52□□□□□ -1.37
PUP2YGR253C THR1P17423 357 aaKnown RBP6.52□□□□□ -1.37
PUP2YGR253C TEF4P36008 412 aaKnown RBP6.52□□□□□ -1.37
PUP2YGR253C ARN2P38724 620 aa6.52□□□□□ -1.37
PUP2YGR253C YHL037CP38733 133 aa6.52□□□□□ -1.37
PUP2YGR253C GPP1P41277 250 aaKnown RBP6.52□□□□□ -1.37
PUP2YGR253C LGE1Q02796 332 aaKnown RBP6.52□□□□□ -1.37
PUP2YGR253C YPL039WQ03080 316 aa6.52□□□□□ -1.37
PUP2YGR253C RSN1Q03516 953 aa6.52□□□□□ -1.37
PUP2YGR253C RAF1Q06891 181 aa6.52□□□□□ -1.37
PUP2YGR253C PSY3Q12318 242 aa6.52□□□□□ -1.37
PUP2YGR253C Q0297Q9ZZV8 51 aa6.52□□□□□ -1.37
PUP2YGR253C RNA1P11745 407 aaKnown RBP6.51□□□□□ -1.37
PUP2YGR253C CCA1P21269 546 aa6.51□□□□□ -1.37
PUP2YGR253C UTR1P21373 530 aa6.51□□□□□ -1.37
PUP2YGR253C SAN1P22470 610 aa6.51□□□□□ -1.37
PUP2YGR253C EHD3P28817 500 aa6.51□□□□□ -1.37
PUP2YGR253C SSE1P32589 693 aaKnown RBP6.51□□□□□ -1.37
PUP2YGR253C ZTA1P38230 334 aaKnown RBP6.51□□□□□ -1.37
PUP2YGR253C PRS3P38689 320 aaKnown RBP6.51□□□□□ -1.37
PUP2YGR253C ECM34P38728 170 aa6.51□□□□□ -1.37
PUP2YGR253C YFL051CP43552 160 aa6.51□□□□□ -1.37
PUP2YGR253C NIT2P47016 307 aa6.51□□□□□ -1.37
PUP2YGR253C RNR4P49723 345 aaKnown RBP6.51□□□□□ -1.37
PUP2YGR253C LYS5P50113 272 aa6.51□□□□□ -1.37
PUP2YGR253C MAL12P53341 584 aa6.51□□□□□ -1.37
PUP2YGR253C COS6P53344 381 aa6.51□□□□□ -1.37
PUP2YGR253C RNT1Q02555 471 aa6.51□□□□□ -1.37
PUP2YGR253C NUP116Q02630 1113 aa6.51□□□□□ -1.37
PUP2YGR253C YMR265CQ03508 461 aaKnown RBP6.51□□□□□ -1.37
PUP2YGR253C COX20Q04935 205 aa6.51□□□□□ -1.37
PUP2YGR253C SSQ1Q05931 657 aaPredicted RBP6.51□□□□□ -1.37
PUP2YGR253C MRL1Q06815 381 aa6.51□□□□□ -1.37
PUP2YGR253C DCI1Q08558 271 aa6.51□□□□□ -1.37
PUP2YGR253C RDL2Q08742 149 aaKnown RBP6.51□□□□□ -1.37
PUP2YGR253C BPH1P25356 2167 aa6.5□□□□□ -1.37
PUP2YGR253C PUT2P07275 575 aa6.5□□□□□ -1.37
PUP2YGR253C TFS1P14306 219 aa6.5□□□□□ -1.37
PUP2YGR253C MER1P16523 270 aa6.5□□□□□ -1.37
PUP2YGR253C SEC2P17065 759 aa6.5□□□□□ -1.37
PUP2YGR253C CLB3P24870 427 aa6.5□□□□□ -1.37
PUP2YGR253C LHP1P33399 275 aaKnown RBP6.5□□□□□ -1.37
PUP2YGR253C MTC4P38335 694 aaKnown RBP6.5□□□□□ -1.37
PUP2YGR253C TSC10P38342 320 aa6.5□□□□□ -1.37
PUP2YGR253C ARF3P40994 183 aaRIP-Chip data6.5□□□□□ -1.37not detected
PUP2YGR253C CTL1Q03220 320 aaKnown RBP6.5□□□□□ -1.37
PUP2YGR253C YOR214CQ12282 236 aa6.5□□□□□ -1.37
PUP2YGR253C ARG3P05150 338 aa6.49□□□□□ -1.37
PUP2YGR253C CYS4P32582 507 aaKnown RBP6.49□□□□□ -1.37
PUP2YGR253C MRPL39P36533 70 aa6.49□□□□□ -1.37
PUP2YGR253C RCK1P38622 512 aa6.49□□□□□ -1.37
PUP2YGR253C MTC6P38849 526 aa6.49□□□□□ -1.37
PUP2YGR253C AVT7P40501 490 aa6.49□□□□□ -1.37
PUP2YGR253C CCT7P42943 550 aaKnown RBP6.49□□□□□ -1.37
PUP2YGR253C TOM22P49334 152 aa6.49□□□□□ -1.37
PUP2YGR253C ARC35P53731 342 aaKnown RBP6.49□□□□□ -1.37
PUP2YGR253C YML119WQ03208 357 aa6.49□□□□□ -1.37
PUP2YGR253C API2Q04413 109 aa6.49□□□□□ -1.37
PUP2YGR253C ENB1Q08299 606 aa6.49□□□□□ -1.37
PUP2YGR253C MCP1Q12106 302 aa6.49□□□□□ -1.37
PUP2YGR253C GFD2P25370 566 aaKnown RBP6.48□□□□□ -1.37
PUP2YGR253C RAD14P28519 371 aa6.48□□□□□ -1.37
PUP2YGR253C MRPS5P33759 307 aa6.48□□□□□ -1.37
PUP2YGR253C YKL187CP34231 750 aa6.48□□□□□ -1.37
PUP2YGR253C YHR180WP38868 163 aa6.48□□□□□ -1.37
PUP2YGR253C MNN9P39107 395 aaKnown RBP6.48□□□□□ -1.37
PUP2YGR253C YTA6P40328 754 aa6.48□□□□□ -1.37
PUP2YGR253C IDP2P41939 412 aa6.48□□□□□ -1.37
PUP2YGR253C TDA10P42938 290 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms