RNA–Protein interactions for RNA: YER059W

PCL6, Transcript of Pho85p cyclin of the Pho80p subfamily, yeast

Gene PCL6, Length 1,263 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL6	YER059W	RGS2	Q99188	309 aa		4.63	□□□□□ -1.67
PCL6	YER059W	MEX67	Q99257	599 aa	Known RBP	4.63	□□□□□ -1.67
PCL6	YER059W	HHF1	P02309	103 aa	Known RBP	4.62	□□□□□ -1.67
PCL6	YER059W	DAL5	P15365	543 aa		4.62	□□□□□ -1.67
PCL6	YER059W	SSE1	P32589	693 aa	Known RBP	4.62	□□□□□ -1.67
PCL6	YER059W	VAM7	P32912	316 aa		4.62	□□□□□ -1.67
PCL6	YER059W	YBR139W	P38109	508 aa		4.62	□□□□□ -1.67
PCL6	YER059W	YHK8	P38776	514 aa		4.62	□□□□□ -1.67
PCL6	YER059W	YHR131C	P38835	850 aa		4.62	□□□□□ -1.67
PCL6	YER059W	MTM1	P53320	366 aa		4.62	□□□□□ -1.67
PCL6	YER059W	CWC25	P53854	179 aa	Known RBP	4.62	□□□□□ -1.67
PCL6	YER059W	PBA1	Q05778	276 aa		4.62	□□□□□ -1.67
PCL6	YER059W	APC5	Q08683	685 aa		4.62	□□□□□ -1.67
PCL6	YER059W	YOR387C	Q08910	206 aa		4.62	□□□□□ -1.67
PCL6	YER059W	YER078W-A	Q3E7A2	54 aa		4.62	□□□□□ -1.67
PCL6	YER059W	CYC3	P06182	269 aa		4.61	□□□□□ -1.67
PCL6	YER059W	RPS16A	P0CX51	143 aa	Known RBP	4.61	□□□□□ -1.67
PCL6	YER059W	RPS16B	P0CX52	143 aa	Known RBP	4.61	□□□□□ -1.67
PCL6	YER059W	RTC2	P38279	296 aa		4.61	□□□□□ -1.67
PCL6	YER059W	NDT80	P38830	627 aa		4.61	□□□□□ -1.67
PCL6	YER059W	YHR182W	P38870	785 aa		4.61	□□□□□ -1.67
PCL6	YER059W	PTH1	P38876	190 aa	Known RBP	4.61	□□□□□ -1.67
PCL6	YER059W	MNN9	P39107	395 aa	Known RBP	4.61	□□□□□ -1.67
PCL6	YER059W	YMR134W	P40207	237 aa		4.61	□□□□□ -1.67
PCL6	YER059W	AIM20	P40451	204 aa		4.61	□□□□□ -1.67
PCL6	YER059W	AIM24	P47127	394 aa		4.61	□□□□□ -1.67
PCL6	YER059W	VTI1	Q04338	217 aa		4.61	□□□□□ -1.67
PCL6	YER059W	YDR262W	Q12331	272 aa		4.61	□□□□□ -1.67
PCL6	YER059W	YIL002W-A	Q3E7Z5	69 aa		4.61	□□□□□ -1.67
PCL6	YER059W	YCR024C-B	Q3E7Z8	88 aa		4.61	□□□□□ -1.67
PCL6	YER059W	NAM2	P11325	894 aa		4.6	□□□□□ -1.67
PCL6	YER059W	DPH5	P32469	300 aa	Predicted RBP	4.6	□□□□□ -1.67
PCL6	YER059W	YBL059W	P34224	193 aa		4.6	□□□□□ -1.67
PCL6	YER059W	MRPL40	P36534	297 aa		4.6	□□□□□ -1.67
PCL6	YER059W	HAC1	P41546	238 aa		4.6	□□□□□ -1.67
PCL6	YER059W	LCB3	P47013	409 aa		4.6	□□□□□ -1.67
PCL6	YER059W	COS1	P53822	381 aa		4.6	□□□□□ -1.67
PCL6	YER059W	ERV25	P54837	211 aa	Known RBP	4.6	□□□□□ -1.67
PCL6	YER059W	NAT4	Q04751	285 aa		4.6	□□□□□ -1.67
PCL6	YER059W	MSC3	Q05812	728 aa		4.6	□□□□□ -1.67
PCL6	YER059W	MRPL35	Q06678	367 aa		4.6	□□□□□ -1.67
PCL6	YER059W	MXR2	P25566	168 aa		4.59	□□□□□ -1.67
PCL6	YER059W	POP5	P28005	173 aa		4.59	□□□□□ -1.67
PCL6	YER059W	DEG1	P31115	442 aa	Known RBP	4.59	□□□□□ -1.67
PCL6	YER059W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
PCL6	YER059W	ECM8	P38246	354 aa		4.59	□□□□□ -1.67
PCL6	YER059W	ABM1	P47146	123 aa		4.59	□□□□□ -1.67
PCL6	YER059W	YMR010W	Q03687	405 aa		4.59	□□□□□ -1.67
PCL6	YER059W	CAB5	Q03941	241 aa		4.59	□□□□□ -1.67
PCL6	YER059W	STE23	Q06010	1027 aa		4.59	□□□□□ -1.67
PCL6	YER059W	YGK3	Q12222	375 aa	Predicted RBP	4.59	□□□□□ -1.67
PCL6	YER059W	PCL9	Q12477	304 aa		4.59	□□□□□ -1.67
PCL6	YER059W	ARF2	P19146	181 aa	Known RBP	4.58	□□□□□ -1.68
PCL6	YER059W	KAR9	P32526	644 aa		4.58	□□□□□ -1.68
PCL6	YER059W	MRPS5	P33759	307 aa		4.58	□□□□□ -1.68
PCL6	YER059W	EBP2	P36049	427 aa	Known RBP	4.58	□□□□□ -1.68
PCL6	YER059W	SWC5	P38326	303 aa		4.58	□□□□□ -1.68
PCL6	YER059W	KRE9	P39005	276 aa		4.58	□□□□□ -1.68
PCL6	YER059W	CCT4	P39078	528 aa	Known RBP	4.58	□□□□□ -1.68
PCL6	YER059W	RBG1	P39729	369 aa		4.58	□□□□□ -1.68
PCL6	YER059W	ELP3	Q02908	557 aa	Known RBP	4.58	□□□□□ -1.68
PCL6	YER059W	CUR1	Q06469	252 aa		4.58	□□□□□ -1.68
PCL6	YER059W	GAT3	Q07928	141 aa		4.58	□□□□□ -1.68
PCL6	YER059W	YMR230W-A	Q3E7B5	62 aa		4.58	□□□□□ -1.68
PCL6	YER059W	GAL7	P08431	366 aa		4.57	□□□□□ -1.68
PCL6	YER059W	SPT15	P13393	240 aa	Known RBP	4.57	□□□□□ -1.68
PCL6	YER059W	DAL2	P25335	343 aa		4.57	□□□□□ -1.68
PCL6	YER059W	CIN8	P27895	1000 aa		4.57	□□□□□ -1.68
PCL6	YER059W	RTT105	P40063	208 aa		4.57	□□□□□ -1.68
PCL6	YER059W	AIP1	P46680	615 aa	Known RBP	4.57	□□□□□ -1.68
PCL6	YER059W	LST7	P53237	242 aa		4.57	□□□□□ -1.68
PCL6	YER059W	EGD1	Q02642	157 aa	Known RBP	4.57	□□□□□ -1.68
PCL6	YER059W	TDA1	Q03533	586 aa		4.57	□□□□□ -1.68
PCL6	YER059W	BUR2	Q05949	395 aa		4.57	□□□□□ -1.68
PCL6	YER059W	YLH47	Q06493	454 aa		4.57	□□□□□ -1.68
PCL6	YER059W	ERV2	Q12284	196 aa		4.57	□□□□□ -1.68
PCL6	YER059W	RPL18A	P0CX49	186 aa	Known RBP	4.56	□□□□□ -1.68
PCL6	YER059W	RPL18B	P0CX50	186 aa	Known RBP	4.56	□□□□□ -1.68
PCL6	YER059W	PUT4	P15380	627 aa		4.56	□□□□□ -1.68
PCL6	YER059W	DBP3	P20447	523 aa	Known RBP	4.56	□□□□□ -1.68
PCL6	YER059W	YPS1	P32329	569 aa		4.56	□□□□□ -1.68
PCL6	YER059W	ZUO1	P32527	433 aa	Known RBP	4.56	□□□□□ -1.68
PCL6	YER059W	YHR218W	P38899	603 aa		4.56	□□□□□ -1.68
PCL6	YER059W	BTT1	P40314	149 aa	Predicted RBP	4.56	□□□□□ -1.68
PCL6	YER059W	KEG1	P43614	200 aa		4.56	□□□□□ -1.68
PCL6	YER059W	TRF5	P48561	642 aa	Known RBP	4.56	□□□□□ -1.68
PCL6	YER059W	RTN1	Q04947	295 aa	Known RBP	4.56	□□□□□ -1.68
PCL6	YER059W	HRI1	Q05905	244 aa	Known RBP	4.56	□□□□□ -1.68
PCL6	YER059W	DET1	Q99288	334 aa	Known RBP	4.56	□□□□□ -1.68
PCL6	YER059W	MSI1	P13712	422 aa		4.55	□□□□□ -1.68
PCL6	YER059W	SAR1	P20606	190 aa	Known RBP	4.55	□□□□□ -1.68
PCL6	YER059W	FAR1	P21268	830 aa		4.55	□□□□□ -1.68
PCL6	YER059W	CPR3	P25719	182 aa		4.55	□□□□□ -1.68
PCL6	YER059W	ARO2	P28777	376 aa	Known RBP	4.55	□□□□□ -1.68
PCL6	YER059W	MYO3	P36006	1272 aa		4.55	□□□□□ -1.68
PCL6	YER059W	MPP10	P47083	593 aa	Known RBP	4.55	□□□□□ -1.68
PCL6	YER059W	YJR030C	P47101	745 aa		4.55	□□□□□ -1.68
PCL6	YER059W	VOA1	P53262	265 aa		4.55	□□□□□ -1.68
PCL6	YER059W	YPR091C	Q06833	770 aa		4.55	□□□□□ -1.68
PCL6	YER059W	FCY22	Q12119	530 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms