RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C MEX67Q99257 599 aaKnown RBP3.29□□□□□ -1.88
TCA17YEL048C RPL12AP0CX53 165 aaKnown RBP3.28□□□□□ -1.88
TCA17YEL048C RPL12BP0CX54 165 aa3.28□□□□□ -1.88
TCA17YEL048C CMK2P22517 447 aa3.28□□□□□ -1.88
TCA17YEL048C GIT1P25346 518 aa3.28□□□□□ -1.88
TCA17YEL048C ZUO1P32527 433 aaKnown RBP3.28□□□□□ -1.88
TCA17YEL048C SOL2P37262 315 aa3.28□□□□□ -1.88
TCA17YEL048C BUD27P43573 796 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
TCA17YEL048C SWI3P32591 825 aa3.27□□□□□ -1.89
TCA17YEL048C YSC83P32792 385 aa3.27□□□□□ -1.89
TCA17YEL048C SPO23P33757 523 aa3.27□□□□□ -1.89
TCA17YEL048C BMT2P38278 337 aa3.27□□□□□ -1.89
TCA17YEL048C WSC4P38739 605 aa3.27□□□□□ -1.89
TCA17YEL048C PEX22P39718 180 aa3.27□□□□□ -1.89
TCA17YEL048C YER184CP39961 794 aa3.27□□□□□ -1.89
TCA17YEL048C TRF5P48561 642 aaKnown RBP3.27□□□□□ -1.89
TCA17YEL048C REX2P54964 269 aaKnown RBP3.27□□□□□ -1.89
TCA17YEL048C ASA1Q06822 443 aa3.27□□□□□ -1.89
TCA17YEL048C ECT1P33412 323 aa3.26□□□□□ -1.89
TCA17YEL048C JEM1P40358 645 aa3.26□□□□□ -1.89
TCA17YEL048C TOS2P50078 622 aa3.26□□□□□ -1.89
TCA17YEL048C VHT1P53241 593 aa3.26□□□□□ -1.89
TCA17YEL048C RRN9P53437 365 aa3.26□□□□□ -1.89
TCA17YEL048C RPL21AQ02753 160 aaKnown RBP3.26□□□□□ -1.89
TCA17YEL048C ERO1Q03103 563 aa3.26□□□□□ -1.89
TCA17YEL048C ENT5Q03769 411 aaKnown RBP3.26□□□□□ -1.89
TCA17YEL048C URC2Q04411 772 aa3.26□□□□□ -1.89
TCA17YEL048C GPM3Q12326 303 aa3.26□□□□□ -1.89
TCA17YEL048C RPL21BQ12672 160 aaKnown RBP3.26□□□□□ -1.89
TCA17YEL048C RPS18AP0CX55 146 aaKnown RBP3.25□□□□□ -1.89
TCA17YEL048C RPS18BP0CX56 146 aaPredicted RBP3.25□□□□□ -1.89
TCA17YEL048C YDR541CQ03049 344 aa3.25□□□□□ -1.89
TCA17YEL048C MSC3Q05812 728 aa3.25□□□□□ -1.89
TCA17YEL048C RAX2Q12465 1220 aa3.25□□□□□ -1.89
TCA17YEL048C ASP3-2P0CX77 362 aa3.24□□□□□ -1.89
TCA17YEL048C ASP3-3P0CX78 362 aa3.24□□□□□ -1.89
TCA17YEL048C ASP3-4P0CX79 362 aa3.24□□□□□ -1.89
TCA17YEL048C ASP3-1P0CZ17 362 aa3.24□□□□□ -1.89
TCA17YEL048C PFF1P38244 976 aa3.24□□□□□ -1.89
TCA17YEL048C PMT5P52867 743 aa3.24□□□□□ -1.89
TCA17YEL048C YHC1Q05900 231 aaKnown RBP3.24□□□□□ -1.89
TCA17YEL048C LDS2Q08218 356 aa3.24□□□□□ -1.89
TCA17YEL048C APE4P38821 490 aa3.23□□□□□ -1.89
TCA17YEL048C SEC27P41811 889 aaKnown RBP3.23□□□□□ -1.89
TCA17YEL048C ATP22P50273 684 aaPredicted RBP3.23□□□□□ -1.89
TCA17YEL048C RTT102P53330 157 aa3.23□□□□□ -1.89
TCA17YEL048C GYL1Q04322 720 aa3.23□□□□□ -1.89
TCA17YEL048C AAD15Q08361 143 aa3.23□□□□□ -1.89
TCA17YEL048C MDL1P33310 695 aa3.22□□□□□ -1.89
TCA17YEL048C DTR1P38125 572 aa3.22□□□□□ -1.89
TCA17YEL048C KAP104P38217 918 aaKnown RBP3.22□□□□□ -1.89
TCA17YEL048C GDI1P39958 451 aaKnown RBP3.22□□□□□ -1.89
TCA17YEL048C CWC22P53333 577 aaKnown RBP3.22□□□□□ -1.89
TCA17YEL048C PRP38Q00723 242 aaPredicted RBP3.22□□□□□ -1.89
TCA17YEL048C NDL1Q06568 189 aa3.22□□□□□ -1.89
TCA17YEL048C PRM7Q12459 698 aa3.22□□□□□ -1.89
TCA17YEL048C PUT4P15380 627 aa3.21□□□□□ -1.9
TCA17YEL048C OPI1P21957 404 aa3.21□□□□□ -1.9
TCA17YEL048C PUP2P32379 260 aa3.21□□□□□ -1.9
TCA17YEL048C FMT1P32785 401 aa3.21□□□□□ -1.9
TCA17YEL048C CHL4P38907 458 aa3.21□□□□□ -1.9
TCA17YEL048C YJL055WP47044 245 aa3.21□□□□□ -1.9
TCA17YEL048C YDR115WQ04598 105 aa3.21□□□□□ -1.9
TCA17YEL048C YLR177WQ06251 628 aa3.21□□□□□ -1.9
TCA17YEL048C LDB17Q12342 491 aa3.21□□□□□ -1.9
TCA17YEL048C RPS19AP07280 144 aaKnown RBP3.2□□□□□ -1.9
TCA17YEL048C RPS19BP07281 144 aaPredicted RBP3.2□□□□□ -1.9
TCA17YEL048C TOA2P32774 122 aa3.2□□□□□ -1.9
TCA17YEL048C GDT1P38301 280 aaPredicted RBP3.2□□□□□ -1.9
TCA17YEL048C WSS1P38838 269 aa3.2□□□□□ -1.9
TCA17YEL048C MNL1P38888 796 aa3.2□□□□□ -1.9
TCA17YEL048C MEH1Q02205 184 aa3.2□□□□□ -1.9
TCA17YEL048C PIN3Q06449 215 aa3.2□□□□□ -1.9
TCA17YEL048C SPE3Q12074 293 aaKnown RBP3.2□□□□□ -1.9
TCA17YEL048C MCT1Q12283 360 aa3.2□□□□□ -1.9
TCA17YEL048C SFM1Q12314 213 aa3.2□□□□□ -1.9
TCA17YEL048C TPI1P00942 248 aaKnown RBP3.19□□□□□ -1.9
TCA17YEL048C RNA1P11745 407 aaKnown RBP3.19□□□□□ -1.9
TCA17YEL048C MNE1P24720 663 aa3.19□□□□□ -1.9
TCA17YEL048C RPL16AP26784 199 aaKnown RBP3.19□□□□□ -1.9
TCA17YEL048C LDS1P31379 325 aa3.19□□□□□ -1.9
TCA17YEL048C VPH1P32563 840 aaKnown RBP3.19□□□□□ -1.9
TCA17YEL048C SEC28P40509 296 aaKnown RBP3.19□□□□□ -1.9
TCA17YEL048C KEG1P43614 200 aa3.19□□□□□ -1.9
TCA17YEL048C CIN2P46670 268 aa3.19□□□□□ -1.9
TCA17YEL048C ABM1P47146 123 aa3.19□□□□□ -1.9
TCA17YEL048C VEL1P53058 206 aa3.19□□□□□ -1.9
TCA17YEL048C HST1P53685 503 aa3.19□□□□□ -1.9
TCA17YEL048C FSH2Q05015 223 aa3.19□□□□□ -1.9
TCA17YEL048C PAR32Q12515 295 aaKnown RBP3.19□□□□□ -1.9
TCA17YEL048C MAS2P11914 482 aa3.18□□□□□ -1.9
TCA17YEL048C YBR241CP38142 488 aa3.18□□□□□ -1.9
TCA17YEL048C RXT2P38255 430 aa3.18□□□□□ -1.9
TCA17YEL048C PFS2P42841 465 aaKnown RBP3.18□□□□□ -1.9
TCA17YEL048C ASN2P49090 572 aaKnown RBP3.18□□□□□ -1.9
TCA17YEL048C VAC7P53950 1165 aa3.18□□□□□ -1.9
TCA17YEL048C RPN5Q12250 445 aaKnown RBP3.18□□□□□ -1.9
TCA17YEL048C YPS3Q12303 508 aa3.18□□□□□ -1.9
TCA17YEL048C SPT7P35177 1332 aa3.18□□□□□ -1.9
TCA17YEL048C HEM4P06174 275 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms