RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeast

Gene RRP1, Length 837 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP1	YDR087C	RET3	P53600	189 aa		4.6	□□□□□ -1.67
RRP1	YDR087C	YNL143C	P53908	130 aa		4.6	□□□□□ -1.67
RRP1	YDR087C	YPR091C	Q06833	770 aa		4.6	□□□□□ -1.67
RRP1	YDR087C	CMS1	Q07897	291 aa	Known RBP	4.6	□□□□□ -1.67
RRP1	YDR087C	YOR012W	Q12351	137 aa		4.6	□□□□□ -1.67
RRP1	YDR087C	OPI1	P21957	404 aa		4.59	□□□□□ -1.67
RRP1	YDR087C	RDS1	P25611	832 aa		4.59	□□□□□ -1.67
RRP1	YDR087C	NUP2	P32499	720 aa		4.59	□□□□□ -1.67
RRP1	YDR087C	RAD5	P32849	1169 aa	Predicted RBP	4.59	□□□□□ -1.67
RRP1	YDR087C	YMR027W	Q04371	470 aa		4.59	□□□□□ -1.67
RRP1	YDR087C	YDL114W	Q07530	308 aa		4.59	□□□□□ -1.67
RRP1	YDR087C	PEX27	Q08580	376 aa		4.59	□□□□□ -1.67
RRP1	YDR087C	FCY22	Q12119	530 aa		4.59	□□□□□ -1.67
RRP1	YDR087C	TPM1	P17536	199 aa	Known RBP	4.58	□□□□□ -1.68
RRP1	YDR087C	DBR1	P24309	405 aa	Known RBP	4.58	□□□□□ -1.68
RRP1	YDR087C	FUN26	P31381	517 aa		4.58	□□□□□ -1.68
RRP1	YDR087C	SPT10	P35208	640 aa		4.58	□□□□□ -1.68
RRP1	YDR087C	RTC2	P38279	296 aa		4.58	□□□□□ -1.68
RRP1	YDR087C	KEG1	P43614	200 aa		4.58	□□□□□ -1.68
RRP1	YDR087C	EFM3	P47163	339 aa		4.58	□□□□□ -1.68
RRP1	YDR087C	TRM112	P53738	135 aa	Predicted RBP	4.58	□□□□□ -1.68
RRP1	YDR087C	YDR286C	Q05530	114 aa		4.58	□□□□□ -1.68
RRP1	YDR087C	AIM45	Q12480	344 aa	Known RBP	4.58	□□□□□ -1.68
RRP1	YDR087C	RPS16A	P0CX51	143 aa	Known RBP	4.57	□□□□□ -1.68
RRP1	YDR087C	RPS16B	P0CX52	143 aa	Known RBP	4.57	□□□□□ -1.68
RRP1	YDR087C	MSK1	P32048	576 aa		4.57	□□□□□ -1.68
RRP1	YDR087C	SPO23	P33757	523 aa		4.57	□□□□□ -1.68
RRP1	YDR087C	CAJ1	P39101	391 aa		4.57	□□□□□ -1.68
RRP1	YDR087C	LCP5	P40079	357 aa	Predicted RBP	4.57	□□□□□ -1.68
RRP1	YDR087C	SEC27	P41811	889 aa	Known RBP	4.57	□□□□□ -1.68
RRP1	YDR087C	CLD1	P53264	445 aa		4.57	□□□□□ -1.68
RRP1	YDR087C	SHY1	P53266	389 aa		4.57	□□□□□ -1.68
RRP1	YDR087C	PML1	Q07930	204 aa	Predicted RBP	4.57	□□□□□ -1.68
RRP1	YDR087C	PSY3	Q12318	242 aa		4.57	□□□□□ -1.68
RRP1	YDR087C	YDL199C	Q12407	687 aa		4.57	□□□□□ -1.68
RRP1	YDR087C	SPT7	P35177	1332 aa		4.56	□□□□□ -1.68
RRP1	YDR087C	CHA1	P25379	360 aa	Known RBP	4.56	□□□□□ -1.68
RRP1	YDR087C	VAM7	P32912	316 aa		4.56	□□□□□ -1.68
RRP1	YDR087C	PTK1	P36002	662 aa	Predicted RBP	4.56	□□□□□ -1.68
RRP1	YDR087C	OXA1	P39952	402 aa		4.56	□□□□□ -1.68
RRP1	YDR087C	NAS2	P40555	220 aa		4.56	□□□□□ -1.68
RRP1	YDR087C	MPS2	P53159	387 aa		4.56	□□□□□ -1.68
RRP1	YDR087C	AIM33	Q04516	312 aa		4.56	□□□□□ -1.68
RRP1	YDR087C	PGC1	Q08959	321 aa		4.56	□□□□□ -1.68
RRP1	YDR087C	NAG1	Q8TGN9	163 aa		4.56	□□□□□ -1.68
RRP1	YDR087C	YOR338W	Q99326	363 aa		4.56	□□□□□ -1.68
RRP1	YDR087C	SAG1	P20840	650 aa		4.55	□□□□□ -1.68
RRP1	YDR087C	YBL028C	P38202	106 aa		4.55	□□□□□ -1.68
RRP1	YDR087C	ECM8	P38246	354 aa		4.55	□□□□□ -1.68
RRP1	YDR087C	LYS12	P40495	371 aa	Known RBP	4.55	□□□□□ -1.68
RRP1	YDR087C	CTK3	P46963	296 aa	Predicted RBP	4.55	□□□□□ -1.68
RRP1	YDR087C	RPA34	P47006	233 aa	Predicted RBP	4.55	□□□□□ -1.68
RRP1	YDR087C	TSA2	Q04120	196 aa		4.55	□□□□□ -1.68
RRP1	YDR087C	YET2	Q04210	160 aa		4.55	□□□□□ -1.68
RRP1	YDR087C	YHC1	Q05900	231 aa	Known RBP	4.55	□□□□□ -1.68
RRP1	YDR087C	MCT1	Q12283	360 aa		4.55	□□□□□ -1.68
RRP1	YDR087C	MEX67	Q99257	599 aa	Known RBP	4.55	□□□□□ -1.68
RRP1	YDR087C	STE3	P06783	470 aa		4.54	□□□□□ -1.68
RRP1	YDR087C	MAS2	P11914	482 aa		4.54	□□□□□ -1.68
RRP1	YDR087C	AAT2	P23542	418 aa	Known RBP	4.54	□□□□□ -1.68
RRP1	YDR087C	GRR1	P24814	1151 aa		4.54	□□□□□ -1.68
RRP1	YDR087C	PRR1	P28708	518 aa		4.54	□□□□□ -1.68
RRP1	YDR087C	UIP5	P36137	443 aa		4.54	□□□□□ -1.68
RRP1	YDR087C	CIN2	P46670	268 aa		4.54	□□□□□ -1.68
RRP1	YDR087C	YGL039W	P53183	348 aa	Known RBP	4.54	□□□□□ -1.68
RRP1	YDR087C	AQR1	P53943	586 aa		4.54	□□□□□ -1.68
RRP1	YDR087C	ADD37	Q03233	198 aa		4.54	□□□□□ -1.68
RRP1	YDR087C	PCL9	Q12477	304 aa		4.54	□□□□□ -1.68
RRP1	YDR087C	THR4	P16120	514 aa	Known RBP	4.53	□□□□□ -1.68
RRP1	YDR087C	MRPL8	P22353	238 aa		4.53	□□□□□ -1.68
RRP1	YDR087C	YEL043W	P32618	956 aa		4.53	□□□□□ -1.68
RRP1	YDR087C	YER186C	P40101	306 aa		4.53	□□□□□ -1.68
RRP1	YDR087C	CUE3	P53137	624 aa	Known RBP	4.53	□□□□□ -1.68
RRP1	YDR087C	SKI8	Q02793	397 aa	Predicted RBP	4.53	□□□□□ -1.68
RRP1	YDR087C	FSH3	Q99369	266 aa		4.53	□□□□□ -1.68
RRP1	YDR087C	TCB3	Q03640	1545 aa	Known RBP	4.52	□□□□□ -1.69
RRP1	YDR087C	FAR1	P21268	830 aa		4.52	□□□□□ -1.69
RRP1	YDR087C	EFB1	P32471	206 aa	Known RBP	4.52	□□□□□ -1.69
RRP1	YDR087C	HEM14	P40012	539 aa		4.52	□□□□□ -1.69
RRP1	YDR087C	FYV8	P46949	817 aa	Known RBP	4.52	□□□□□ -1.69
RRP1	YDR087C	PDR16	P53860	351 aa	Known RBP	4.52	□□□□□ -1.69
RRP1	YDR087C	ALF1	P53904	254 aa		4.52	□□□□□ -1.69
RRP1	YDR087C	YLH47	Q06493	454 aa		4.52	□□□□□ -1.69
RRP1	YDR087C	NBL1	Q3E7Y6	73 aa		4.52	□□□□□ -1.69
RRP1	YDR087C	OM14	P38325	134 aa		4.51	□□□□□ -1.69
RRP1	YDR087C	YNL208W	P40159	199 aa	Known RBP	4.51	□□□□□ -1.69
RRP1	YDR087C	SNL1	P40548	159 aa		4.51	□□□□□ -1.69
RRP1	YDR087C	SHS1	Q07657	551 aa		4.51	□□□□□ -1.69
RRP1	YDR087C	HTZ1	Q12692	134 aa	Known RBP	4.51	□□□□□ -1.69
RRP1	YDR087C	DET1	Q99288	334 aa	Known RBP	4.51	□□□□□ -1.69
RRP1	YDR087C	PCL1	P24867	279 aa		4.5	□□□□□ -1.69
RRP1	YDR087C	ZUO1	P32527	433 aa	Known RBP	4.5	□□□□□ -1.69
RRP1	YDR087C	SSE1	P32589	693 aa	Known RBP	4.5	□□□□□ -1.69
RRP1	YDR087C	YHR122W	P38829	231 aa		4.5	□□□□□ -1.69
RRP1	YDR087C	REX2	P54964	269 aa	Known RBP	4.5	□□□□□ -1.69
RRP1	YDR087C	RPS18A	P0CX55	146 aa	Known RBP	4.49	□□□□□ -1.69
RRP1	YDR087C	RPS18B	P0CX56	146 aa	Predicted RBP	4.49	□□□□□ -1.69
RRP1	YDR087C	MAS1	P10507	462 aa		4.49	□□□□□ -1.69
RRP1	YDR087C	TAL1	P15019	335 aa	Known RBP	4.49	□□□□□ -1.69
RRP1	YDR087C	CKI1	P20485	582 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms