RNA–Protein interactions for RNA: YDL179W

PCL9, Transcript of Cyclin, yeast

Gene PCL9, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL9	YDL179W	MRPL8	P22353	238 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	LDB16	P25587	256 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	SMI1	P32566	505 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	PTK1	P36002	662 aa	Predicted RBP	4.19	□□□□□ -1.74
PCL9	YDL179W	LYS12	P40495	371 aa	Known RBP	4.19	□□□□□ -1.74
PCL9	YDL179W	SEC27	P41811	889 aa	Known RBP	4.19	□□□□□ -1.74
PCL9	YDL179W	EGT2	P42835	1041 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	BNS1	P50084	137 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	CLD1	P53264	445 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	YMR027W	Q04371	470 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	PML1	Q07930	204 aa	Predicted RBP	4.19	□□□□□ -1.74
PCL9	YDL179W	PGC1	Q08959	321 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	YOR012W	Q12351	137 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	NBL1	Q3E7Y6	73 aa		4.19	□□□□□ -1.74
PCL9	YDL179W	THR4	P16120	514 aa	Known RBP	4.18	□□□□□ -1.74
PCL9	YDL179W	DBR1	P24309	405 aa	Known RBP	4.18	□□□□□ -1.74
PCL9	YDL179W	PRR1	P28708	518 aa		4.18	□□□□□ -1.74
PCL9	YDL179W	HXT1	P32465	570 aa		4.18	□□□□□ -1.74
PCL9	YDL179W	MIG3	P39943	394 aa		4.18	□□□□□ -1.74
PCL9	YDL179W	YNL208W	P40159	199 aa	Known RBP	4.18	□□□□□ -1.74
PCL9	YDL179W	CMS1	Q07897	291 aa	Known RBP	4.18	□□□□□ -1.74
PCL9	YDL179W	GAT3	Q07928	141 aa		4.18	□□□□□ -1.74
PCL9	YDL179W	PCL9	Q12477	304 aa		4.18	□□□□□ -1.74
PCL9	YDL179W	FSH3	Q99369	266 aa		4.18	□□□□□ -1.74
PCL9	YDL179W	MAS2	P11914	482 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	SAG1	P20840	650 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	NUP2	P32499	720 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	ANR2	P36090	516 aa	Predicted RBP	4.17	□□□□□ -1.74
PCL9	YDL179W	RTC2	P38279	296 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	SDS24	P38314	527 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	OXA1	P39952	402 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	EFM3	P47163	339 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	SHY1	P53266	389 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	AIM33	Q04516	312 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	YPR078C	Q06813	372 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	YDL114W	Q07530	308 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	PSY3	Q12318	242 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	NAG1	Q8TGN9	163 aa		4.17	□□□□□ -1.74
PCL9	YDL179W	TAL1	P15019	335 aa	Known RBP	4.16	□□□□□ -1.74
PCL9	YDL179W	EFB1	P32471	206 aa	Known RBP	4.16	□□□□□ -1.74
PCL9	YDL179W	UIP5	P36137	443 aa		4.16	□□□□□ -1.74
PCL9	YDL179W	PTI1	P39927	425 aa	Predicted RBP	4.16	□□□□□ -1.74
PCL9	YDL179W	UTP18	P40362	594 aa	Predicted RBP	4.16	□□□□□ -1.74
PCL9	YDL179W	YIL089W	P40500	205 aa		4.16	□□□□□ -1.74
PCL9	YDL179W	GAB1	P41733	394 aa		4.16	□□□□□ -1.74
PCL9	YDL179W	ATG18	P43601	500 aa		4.16	□□□□□ -1.74
PCL9	YDL179W	FYV8	P46949	817 aa	Known RBP	4.16	□□□□□ -1.74
PCL9	YDL179W	SHE10	P53075	577 aa		4.16	□□□□□ -1.74
PCL9	YDL179W	MHR1	Q06630	226 aa		4.16	□□□□□ -1.74
PCL9	YDL179W	SHS1	Q07657	551 aa		4.16	□□□□□ -1.74
PCL9	YDL179W	MFG1	Q07684	458 aa		4.16	□□□□□ -1.74
PCL9	YDL179W	YDL199C	Q12407	687 aa		4.16	□□□□□ -1.74
PCL9	YDL179W	MAS1	P10507	462 aa		4.15	□□□□□ -1.75
PCL9	YDL179W	AAT2	P23542	418 aa	Known RBP	4.15	□□□□□ -1.75
PCL9	YDL179W	FUN26	P31381	517 aa		4.15	□□□□□ -1.75
PCL9	YDL179W	YEL043W	P32618	956 aa		4.15	□□□□□ -1.75
PCL9	YDL179W	SPO23	P33757	523 aa		4.15	□□□□□ -1.75
PCL9	YDL179W	YMR310C	Q04867	317 aa	Predicted RBP	4.15	□□□□□ -1.75
PCL9	YDL179W	GLE1	Q12315	538 aa		4.15	□□□□□ -1.75
PCL9	YDL179W	TPM1	P17536	199 aa	Known RBP	4.14	□□□□□ -1.75
PCL9	YDL179W	ANP1	P32629	500 aa		4.14	□□□□□ -1.75
PCL9	YDL179W	BAT1	P38891	393 aa	Known RBP	4.14	□□□□□ -1.75
PCL9	YDL179W	LCP5	P40079	357 aa	Predicted RBP	4.14	□□□□□ -1.75
PCL9	YDL179W	SEC9	P40357	651 aa		4.14	□□□□□ -1.75
PCL9	YDL179W	NAS2	P40555	220 aa		4.14	□□□□□ -1.75
PCL9	YDL179W	PRM1	P53835	661 aa		4.14	□□□□□ -1.75
PCL9	YDL179W	YLR152C	P54072	576 aa		4.14	□□□□□ -1.75
PCL9	YDL179W	YET2	Q04210	160 aa		4.14	□□□□□ -1.75
PCL9	YDL179W	LIP2	Q06005	328 aa		4.14	□□□□□ -1.75
PCL9	YDL179W	YLH47	Q06493	454 aa		4.14	□□□□□ -1.75
PCL9	YDL179W	RPS16A	P0CX51	143 aa	Known RBP	4.13	□□□□□ -1.75
PCL9	YDL179W	RPS16B	P0CX52	143 aa	Known RBP	4.13	□□□□□ -1.75
PCL9	YDL179W	HMX1	P32339	317 aa		4.13	□□□□□ -1.75
PCL9	YDL179W	VAM7	P32912	316 aa		4.13	□□□□□ -1.75
PCL9	YDL179W	CIN2	P46670	268 aa		4.13	□□□□□ -1.75
PCL9	YDL179W	TIS11	P47977	285 aa		4.13	□□□□□ -1.75
PCL9	YDL179W	REX2	P54964	269 aa	Known RBP	4.13	□□□□□ -1.75
PCL9	YDL179W	YMR010W	Q03687	405 aa		4.13	□□□□□ -1.75
PCL9	YDL179W	YOL075C	Q08234	1294 aa		4.13	□□□□□ -1.75
PCL9	YDL179W	AIM45	Q12480	344 aa	Known RBP	4.13	□□□□□ -1.75
PCL9	YDL179W	RPS18A	P0CX55	146 aa	Known RBP	4.12	□□□□□ -1.75
PCL9	YDL179W	RPS18B	P0CX56	146 aa	Predicted RBP	4.12	□□□□□ -1.75
PCL9	YDL179W	CKI1	P20485	582 aa		4.12	□□□□□ -1.75
PCL9	YDL179W	TRX1	P22217	103 aa	Known RBP	4.12	□□□□□ -1.75
PCL9	YDL179W	GRR1	P24814	1151 aa		4.12	□□□□□ -1.75
PCL9	YDL179W	SSE1	P32589	693 aa	Known RBP	4.12	□□□□□ -1.75
PCL9	YDL179W	DFG10	P40526	253 aa		4.12	□□□□□ -1.75
PCL9	YDL179W	CTK3	P46963	296 aa	Predicted RBP	4.12	□□□□□ -1.75
PCL9	YDL179W	PDR16	P53860	351 aa	Known RBP	4.12	□□□□□ -1.75
PCL9	YDL179W	SPR1	P32603	445 aa		4.11	□□□□□ -1.75
PCL9	YDL179W	YER186C	P40101	306 aa		4.11	□□□□□ -1.75
PCL9	YDL179W	AIP1	P46680	615 aa	Known RBP	4.11	□□□□□ -1.75
PCL9	YDL179W	TRF5	P48561	642 aa	Known RBP	4.11	□□□□□ -1.75
PCL9	YDL179W	YGL039W	P53183	348 aa	Known RBP	4.11	□□□□□ -1.75
PCL9	YDL179W	HST1	P53685	503 aa		4.11	□□□□□ -1.75
PCL9	YDL179W	SMP3	Q04174	516 aa		4.11	□□□□□ -1.75
PCL9	YDL179W	ARR1	Q06596	294 aa		4.11	□□□□□ -1.75
PCL9	YDL179W	DET1	Q99288	334 aa	Known RBP	4.11	□□□□□ -1.75
PCL9	YDL179W	VMA2	P16140	517 aa	Known RBP	4.1	□□□□□ -1.75
PCL9	YDL179W	CDC50	P25656	391 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms