RNA–Protein interactions for RNA: YAR008W

SEN34, Transcript of Subunit of the tRNA splicing endonuclease, yeast

Gene SEN34, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN34	YAR008W	APC9	Q12107	265 aa		5.33	□□□□□ -1.56
SEN34	YAR008W	RPN5	Q12250	445 aa	Known RBP	5.33	□□□□□ -1.56
SEN34	YAR008W	ADE5,7	P07244	802 aa	Known RBP	5.32	□□□□□ -1.56
SEN34	YAR008W	ALG7	P07286	448 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	YCK1	P23291	538 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	OCA4	P25366	362 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	NFS1	P25374	497 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	BYE1	P36106	594 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	YKR073C	P36153	106 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	SHO1	P40073	367 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	PSA1	P41940	361 aa	Known RBP	5.32	□□□□□ -1.56
SEN34	YAR008W	YFL051C	P43552	160 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	BIT61	P47041	543 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	RNR4	P49723	345 aa	Known RBP	5.32	□□□□□ -1.56
SEN34	YAR008W	TAF6	P53040	516 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	NCE101	Q02820	53 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	BUR2	Q05949	395 aa		5.32	□□□□□ -1.56
SEN34	YAR008W	ATP4	P05626	244 aa		5.31	□□□□□ -1.56
SEN34	YAR008W	BAR1	P12630	587 aa		5.31	□□□□□ -1.56
SEN34	YAR008W	RPL5	P26321	297 aa	Known RBP	5.31	□□□□□ -1.56
SEN34	YAR008W	DBF20	P32328	564 aa		5.31	□□□□□ -1.56
SEN34	YAR008W	ISC10	P32645	267 aa		5.31	□□□□□ -1.56
SEN34	YAR008W	PEX6	P33760	1030 aa		5.31	□□□□□ -1.56
SEN34	YAR008W	EXO84	P38261	753 aa		5.31	□□□□□ -1.56
SEN34	YAR008W	SOK2	P53438	785 aa	Predicted RBP	5.31	□□□□□ -1.56
SEN34	YAR008W	ASI1	P54074	624 aa		5.31	□□□□□ -1.56
SEN34	YAR008W	YOL019W	Q08157	551 aa		5.31	□□□□□ -1.56
SEN34	YAR008W	SWM1	Q12379	170 aa		5.31	□□□□□ -1.56
SEN34	YAR008W	CBS1	P14066	229 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	MDH2	P22133	377 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	YME1	P32795	747 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	MRPL39	P36533	70 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	AMN1	P38285	549 aa	Predicted RBP	5.3	□□□□□ -1.56
SEN34	YAR008W	YHL012W	P38709	493 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	LYS12	P40495	371 aa	Known RBP	5.3	□□□□□ -1.56
SEN34	YAR008W	IDP2	P41939	412 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	OGG1	P53397	376 aa	Predicted RBP	5.3	□□□□□ -1.56
SEN34	YAR008W	GOR1	P53839	350 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	IDP3	P53982	420 aa	Known RBP	5.3	□□□□□ -1.56
SEN34	YAR008W	IRC15	Q02733	499 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	SWP1	Q02795	286 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	ECM11	Q04110	302 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	RNH1	Q04740	348 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	YLR040C	Q07988	224 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	YLR053C	Q12026	108 aa		5.3	□□□□□ -1.56
SEN34	YAR008W	TRP3	P00937	484 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	CBP2	P03874	630 aa	Predicted RBP	5.29	□□□□□ -1.56
SEN34	YAR008W	CDC31	P06704	161 aa	Known RBP	5.29	□□□□□ -1.56
SEN34	YAR008W	RHO2	P06781	192 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	NUP1	P20676	1076 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	SAN1	P22470	610 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	PBN1	P25580	416 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	BUB2	P26448	306 aa	Predicted RBP	5.29	□□□□□ -1.56
SEN34	YAR008W	SSE1	P32589	693 aa	Known RBP	5.29	□□□□□ -1.56
SEN34	YAR008W	CAT2	P32796	670 aa	Known RBP	5.29	□□□□□ -1.56
SEN34	YAR008W	SPC29	P33419	253 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	NSG1	P38837	291 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	SCS2	P40075	244 aa	Known RBP	5.29	□□□□□ -1.56
SEN34	YAR008W	PRE6	P40303	254 aa	Known RBP	5.29	□□□□□ -1.56
SEN34	YAR008W	MDJ2	P42834	146 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	GTO1	P48239	356 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	MRK1	P50873	501 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	LSG1	P53145	640 aa	Known RBP	5.29	□□□□□ -1.56
SEN34	YAR008W	SLM2	P53955	656 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	INP1	Q03694	420 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	API2	Q04413	109 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	VPS74	Q06385	345 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	VHS3	Q08438	674 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	YPL191C	Q08930	360 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	PSY3	Q12318	242 aa		5.29	□□□□□ -1.56
SEN34	YAR008W	TMA7	Q3E764	64 aa	Known RBP	5.29	□□□□□ -1.56
SEN34	YAR008W	MDN1	Q12019	4910 aa	Known RBP	5.28	□□□□□ -1.56
SEN34	YAR008W	CAR2	P07991	424 aa	Known RBP	5.28	□□□□□ -1.56
SEN34	YAR008W	ADH4	P10127	382 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	TFS1	P14306	219 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	AAR2	P32357	355 aa	Predicted RBP	5.28	□□□□□ -1.56
SEN34	YAR008W	SEC17	P32602	292 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	ARC19	P33204	171 aa	Known RBP	5.28	□□□□□ -1.56
SEN34	YAR008W	LOS1	P33418	1100 aa	Predicted RBP	5.28	□□□□□ -1.56
SEN34	YAR008W	YBR220C	P38318	560 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	ANS1	P38832	159 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	YHR177W	P38867	453 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	NIT2	P47016	307 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	AAD10	P47182	288 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	DUG3	P53871	357 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	ACS1	Q01574	713 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	SPC19	Q03954	165 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	SNX41	Q04053	625 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	YMR310C	Q04867	317 aa	Predicted RBP	5.28	□□□□□ -1.56
SEN34	YAR008W	YLR036C	Q07986	203 aa		5.28	□□□□□ -1.56
SEN34	YAR008W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
SEN34	YAR008W	GFD2	P25370	566 aa	Known RBP	5.27	□□□□□ -1.57
SEN34	YAR008W	CTS1	P29029	562 aa		5.27	□□□□□ -1.57
SEN34	YAR008W	CYS4	P32582	507 aa	Known RBP	5.27	□□□□□ -1.57
SEN34	YAR008W	YPT7	P32939	208 aa		5.27	□□□□□ -1.57
SEN34	YAR008W	YOR062C	P36025	268 aa		5.27	□□□□□ -1.57
SEN34	YAR008W	SPP381	P38282	291 aa	Predicted RBP	5.27	□□□□□ -1.57
SEN34	YAR008W	YHL044W	P38727	235 aa		5.27	□□□□□ -1.57
SEN34	YAR008W	SEC26	P41810	973 aa	Known RBP	5.27	□□□□□ -1.57
SEN34	YAR008W	FAR3	P46671	204 aa		5.27	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms