RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	WDR24	Q96S15	920 aa		12.42	□□□□□ -0.42
GFAP-238	ENST00000640859	PDCD2L	Q9BRP1	358 aa		12.42	□□□□□ -0.42
GFAP-238	ENST00000640859	OLFML3	Q9NRN5	406 aa		12.42	□□□□□ -0.42
GFAP-238	ENST00000640859	RNF146	Q9NTX7	359 aa		12.42	□□□□□ -0.42
GFAP-238	ENST00000640859	REXO2	Q9Y3B8	237 aa	Known RBP	12.42	□□□□□ -0.42
GFAP-238	ENST00000640859	PDXK	O00764	312 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	IRF6	O14896	467 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	ATP2A1	O14983	1001 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	CETN3	O15182	167 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	CALU	O43852	315 aa	Predicted RBP	12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	TBCA	O75347	108 aa	Known RBP	12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	PRPF6	O94906	941 aa	Known RBP	12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	FAM13A	O94988	1023 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	NDUFA10	O95299	355 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	P4HB	P07237	508 aa	Known RBP	12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	TRIM21	P19474	475 aa	Known RBP	12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	EIF2AK2	P19525	551 aa	Known RBP	12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	CASQ1	P31415	396 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	ZNF131	P52739	623 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	HMGCS2	P54868	508 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	NCBP1	Q09161	790 aa	Known RBP	12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	KCNMA1	Q12791	1236 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	ADAM9	Q13443	819 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	COG2	Q14746	738 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	SH3D19	Q5HYK7	790 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	XRRA1	Q6P2D8	792 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	RNF207	Q6ZRF8	634 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	PXMP2	Q9NR77	195 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	HOMER2	Q9NSB8	354 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	KCND2	Q9NZV8	630 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	SEL1L	Q9UBV2	794 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	PNMA3	Q9UL41	463 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	ZNF215	Q9UL58	517 aa	Predicted RBP	12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	AFG3L2	Q9Y4W6	797 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	RIPK3	Q9Y572	518 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	MYH11	P35749	1972 aa		12.41	□□□□□ -0.42
GFAP-238	ENST00000640859	DDX39A	O00148	427 aa	Known RBP	12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	EPHB6	O15197	1021 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	EIF3D	O15371	548 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	AOC2	O75106	756 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	LYPLA2	O95372	231 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	GUCY2C	P25092	1073 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	BAAT	Q14032	418 aa	Predicted RBP	12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	NFIL3	Q16649	462 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	GADL1	Q6ZQY3	521 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	ZNF662	Q6ZS27	426 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	FRMD5	Q7Z6J6	570 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	CCDC170	Q8IYT3	715 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	BANK1	Q8NDB2	785 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	ZNF397	Q8NF99	534 aa	Predicted RBP	12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	FIZ1	Q96SL8	496 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	RMDN3	Q96TC7	470 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	LXN	Q9BS40	222 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	MAF1	Q9H063	256 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	MMRN2	Q9H8L6	949 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	POLD4	Q9HCU8	107 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	TBC1D22B	Q9NU19	505 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	TYW1	Q9NV66	732 aa	Known RBP	12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	FAM184B	Q9ULE4	1060 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	ODF2L	Q9ULJ1	636 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	KCNH4	Q9UQ05	1017 aa		12.4	□□□□□ -0.42
GFAP-238	ENST00000640859	ASTN1	O14525	1302 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	UBE4B	O95155	1302 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	MYPN	Q86TC9	1320 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	SFI1	A8K8P3	1242 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	FAM155A	B1AL88	458 aa	Predicted RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	URI1	O94763	535 aa	Predicted RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	MYCL	P12524	364 aa	Predicted RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	CYLC1	P35663	651 aa	Predicted RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	MAPK7	Q13164	816 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	NAA30	Q147X3	362 aa	Predicted RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	TMEM132B	Q14DG7	1078 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	ARHGEF16	Q5VV41	709 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	PDXDC1	Q6P996	788 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	NSMF	Q6X4W1	530 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	VSIG10L	Q86VR7	867 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	MYCT1	Q8N699	235 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	BAP1	Q92560	729 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	ZSWIM4	Q9H7M6	989 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	PARVG	Q9HBI0	331 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	ZCCHC17	Q9NP64	241 aa	Known RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	LZTFL1	Q9NQ48	299 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	PKD2L1	Q9P0L9	805 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	DBR1	Q9UK59	544 aa	Known RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	ZNF214	Q9UL59	606 aa	Predicted RBP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	PLAGL2	Q9UPG8	496 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	PTPRF	P10586	1907 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859	WDR81	Q562E7	1941 aa		12.39	□□□□□ -0.43
GFAP-238	ENST00000640859		A0A0G2JLL6	359 aa	Predicted RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	ARHGEF35	A5YM69	484 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	EIF3CL	B5ME19	914 aa	Known RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	SLC16A3	O15427	465 aa	Known RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	TGFB1I1	O43294	461 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	KIF5C	O60282	957 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	NOL4	O94818	638 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	GCNT3	O95395	438 aa		12.38	□□□□□ -0.43

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