RNA–Protein interactions for RNA: ENST00000640431.1

PAX6-271, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-271ENST00000640431 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
PAX6-271ENST00000640431 MED4Q9NPJ6 270 aa16.84■□□□□ 0.29
PAX6-271ENST00000640431 FBXO28Q9NVF7 368 aa16.84■□□□□ 0.29
PAX6-271ENST00000640431 KIAA1024Q9UPX6 916 aa16.84■□□□□ 0.29
PAX6-271ENST00000640431 LOC285556D6RIA3 1793 aa16.83■□□□□ 0.29
PAX6-271ENST00000640431 NPHP3-ACAD11A0A0J9YXS1 232 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 POTEB3A0JP26 581 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 F5H6K3 240 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 CXCL11O14625 94 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 PRLRP16471 622 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 MAGEA1P43355 309 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 CACNB1Q02641 598 aaPredicted RBP16.83■□□□□ 0.28
PAX6-271ENST00000640431 KLRC3Q07444 240 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 ZSCAN26Q16670 478 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 CCDC40Q4G0X9 1142 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 FAM83BQ5T0W9 1011 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 NFRKBQ6P4R8 1299 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 POTEBQ6S5H4 581 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 CCNI2Q6ZMN8 369 aaPredicted RBP16.83■□□□□ 0.28
PAX6-271ENST00000640431 MMGT1Q8N4V1 131 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 OSBPL9Q96SU4 736 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 KIAA1683Q9H0B3 1180 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 NYAP2Q9P242 653 aa16.83■□□□□ 0.28
PAX6-271ENST00000640431 SSU72P8A0A1W2PR75 194 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 SYF2O95926 243 aaKnown RBP16.82■□□□□ 0.28
PAX6-271ENST00000640431 PLA2G4BP0C869 781 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 CETPP11597 493 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 QRICH1Q2TAL8 776 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 IFNL1Q8IU54 200 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 NELFCDQ8IXH7 590 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 GDAP1L1Q96MZ0 367 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 ALS2CR12Q96Q35 445 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 VCPKMTQ9H867 229 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 KCNMB3Q9NPA1 279 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 NLRC4Q9NPP4 1024 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 CEP72Q9P209 647 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 THSD7BQ9C0I4 1608 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 HTTP42858 3142 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 MANSC4A6NHS7 340 aaPredicted RBP16.82■□□□□ 0.28
PAX6-271ENST00000640431 SLC1A4P43007 532 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 ANKRD13CQ8N6S4 541 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 CEP63Q96MT8 703 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 NAP1L4Q99733 375 aaKnown RBP16.82■□□□□ 0.28
PAX6-271ENST00000640431 RPAP3Q9H6T3 665 aaPredicted RBP16.82■□□□□ 0.28
PAX6-271ENST00000640431 BMP2KQ9NSY1 1161 aaPredicted RBP16.82■□□□□ 0.28
PAX6-271ENST00000640431 GINM1Q9NU53 330 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 HYOU1Q9Y4L1 999 aa16.82■□□□□ 0.28
PAX6-271ENST00000640431 RBAK-RBAKDNI3L0D1 243 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 PDHXO00330 501 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 TLR2O60603 784 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 TRPA1O75762 1119 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 CYP11B2P19099 503 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 ACTN2P35609 894 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 ITIH3Q06033 890 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 SH3D19Q5HYK7 790 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 SLFN13Q68D06 897 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 GPBP1Q86WP2 473 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 CCDC65Q8IXS2 484 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 GOLGA5Q8TBA6 731 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 SCFD1Q8WVM8 642 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 SELENOOQ9BVL4 669 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 LSM14BQ9BX40 385 aaKnown RBP16.81■□□□□ 0.28
PAX6-271ENST00000640431 ANO3Q9BYT9 981 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 KCTD10Q9H3F6 313 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 TMOD4Q9NZQ9 345 aa16.81■□□□□ 0.28
PAX6-271ENST00000640431 NCK2O43639 380 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 RNF40O75150 1001 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 MED24O75448 989 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 CXCR5P32302 372 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 STAT3P40763 770 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 MARSP56192 900 aaKnown RBP16.8■□□□□ 0.28
PAX6-271ENST00000640431 SNAP25P60880 206 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 APBA1Q02410 837 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 RAD51AP2Q09MP3 1159 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 TDRD12Q587J7 1177 aaKnown RBP16.8■□□□□ 0.28
PAX6-271ENST00000640431 POTEEQ6S8J3 1075 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 TRIM59Q8IWR1 403 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 SPATA4Q8NEY3 305 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 HDAC7Q8WUI4 952 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 MKL1Q969V6 931 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 PSMB7Q99436 277 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 SMARCAL1Q9NZC9 954 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 TESPA1A2RU30 521 aaPredicted RBP16.8■□□□□ 0.28
PAX6-271ENST00000640431 PRPF6O94906 941 aaKnown RBP16.8■□□□□ 0.28
PAX6-271ENST00000640431 TAL1P17542 331 aaPredicted RBP16.8■□□□□ 0.28
PAX6-271ENST00000640431 CAPN2P17655 700 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 TCP1P17987 556 aaKnown RBP16.8■□□□□ 0.28
PAX6-271ENST00000640431 TM4SF4P48230 202 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 USP11P51784 963 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 SLC12A3P55017 1021 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 CDC37Q16543 378 aaPredicted RBP16.8■□□□□ 0.28
PAX6-271ENST00000640431 HERC4Q5GLZ8 1057 aaPredicted RBP16.8■□□□□ 0.28
PAX6-271ENST00000640431 KLHDC7AQ5VTJ3 777 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 SFMBT2Q5VUG0 894 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 SYN2Q92777 582 aaPredicted RBP16.8■□□□□ 0.28
PAX6-271ENST00000640431 MBOAT7Q96N66 472 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 HINFPQ9BQA5 517 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 LRRC1Q9BTT6 524 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 FAM204AQ9H8W3 233 aa16.8■□□□□ 0.28
PAX6-271ENST00000640431 EHD2Q9NZN4 543 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms