RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 MESDQ14696 234 aa11.92□□□□□ -0.5
SCN1B-208ENST00000640135 RFX6Q8HWS3 928 aa11.92□□□□□ -0.5
SCN1B-208ENST00000640135 GPRC5AQ8NFJ5 357 aa11.92□□□□□ -0.5
SCN1B-208ENST00000640135 SMARCAD1Q9H4L7 1026 aa11.92□□□□□ -0.5
SCN1B-208ENST00000640135 JPH1Q9HDC5 661 aaPredicted RBP11.92□□□□□ -0.5
SCN1B-208ENST00000640135 CDC25AP30304 524 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 XKR3Q5GH77 459 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 EPSTI1Q96J88 318 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 NEURL4Q96JN8 1562 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 SYNJ2BP-COX16A0A087WUM0 186 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 MCF2LO15068 1137 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 ATP2C2O75185 946 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 GH1P01241 217 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 STAT5BP51692 787 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 GTF2A2P52657 109 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 C1orf228Q6PIY5 440 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 B4GALNT4Q76KP1 1039 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 SAMD3Q8N6K7 520 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 TMEM35BQ8NCS4 154 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 OR6J1Q8NGC5 347 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 DYDC2Q96IM9 177 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 ZNF560Q96MR9 790 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 COX16Q9P0S2 106 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 SEPT10Q9P0V9 454 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 MST1RQ04912 1400 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 ESYT2A0FGR8 921 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 TRAPPC3O43617 180 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 CIB2O75838 187 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 CASP14P31944 242 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 BRD3Q15059 726 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 CCL15Q16663 113 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 RHOT2Q8IXI1 618 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 PIGOQ8TEQ8 1089 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 SEPT1Q8WYJ6 367 aa11.91□□□□□ -0.5
SCN1B-208ENST00000640135 PDS5AQ29RF7 1337 aaKnown RBP11.91□□□□□ -0.5
SCN1B-208ENST00000640135 PPARGP37231 505 aaPredicted RBP11.9□□□□□ -0.5
SCN1B-208ENST00000640135 INTS5Q6P9B9 1019 aaKnown RBP11.9□□□□□ -0.5
SCN1B-208ENST00000640135 ENOSF1Q7L5Y1 443 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 ARHGAP24Q8N264 748 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 AFAP1L1Q8TED9 768 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
SCN1B-208ENST00000640135 ZBBXA8MT70 800 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 GOLGA8SH3BPF8 625 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 GPC3P51654 580 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 KRT71Q3SY84 523 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 TTBK2Q6IQ55 1244 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 TOGARAM2Q6ZUX3 1019 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 ERICH1Q86X53 443 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 MRRFQ96E11 262 aaKnown RBP11.9□□□□□ -0.5
SCN1B-208ENST00000640135 STRIP2Q9ULQ0 834 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 ASAP2O43150 1006 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 ZNF189O75820 626 aaPredicted RBP11.9□□□□□ -0.5
SCN1B-208ENST00000640135 DGAT1O75907 488 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 MXD4Q14582 209 aaPredicted RBP11.9□□□□□ -0.5
SCN1B-208ENST00000640135 COL23A1Q86Y22 540 aaPredicted RBP11.9□□□□□ -0.5
SCN1B-208ENST00000640135 NUDT12Q9BQG2 462 aa11.9□□□□□ -0.5
SCN1B-208ENST00000640135 BUB1O43683 1085 aa11.9□□□□□ -0.51
SCN1B-208ENST00000640135 NMT2O60551 498 aa11.9□□□□□ -0.51
SCN1B-208ENST00000640135 BANK1Q8NDB2 785 aa11.9□□□□□ -0.51
SCN1B-208ENST00000640135 PPP4R1Q8TF05 950 aa11.9□□□□□ -0.51
SCN1B-208ENST00000640135 PGBD4Q96DM1 585 aa11.9□□□□□ -0.51
SCN1B-208ENST00000640135 LXNQ9BS40 222 aa11.9□□□□□ -0.51
SCN1B-208ENST00000640135 KCND2Q9NZV8 630 aa11.9□□□□□ -0.51
SCN1B-208ENST00000640135 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.9□□□□□ -0.51
SCN1B-208ENST00000640135 RGS16O15492 202 aaPredicted RBP11.89□□□□□ -0.51
SCN1B-208ENST00000640135 LRRN2O75325 713 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 DPCR1Q3MIW9 517 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 SCYL3Q8IZE3 742 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 SCFD2Q8WU76 684 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 SLITRK6Q9H5Y7 841 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 MAP3K20Q9NYL2 800 aaKnown RBP11.89□□□□□ -0.51
SCN1B-208ENST00000640135 LMCD1Q9NZU5 365 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 BCAP29Q9UHQ4 241 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 DAAM1Q9Y4D1 1078 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 RPLP2P05387 115 aaKnown RBP11.89□□□□□ -0.51
SCN1B-208ENST00000640135 HPDP32754 393 aaPredicted RBP11.89□□□□□ -0.51
SCN1B-208ENST00000640135 GCLCP48506 637 aaPredicted RBP11.89□□□□□ -0.51
SCN1B-208ENST00000640135 APBA1Q02410 837 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 PKP1Q13835 747 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 ZNF699Q32M78 642 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 RHPN2Q8IUC4 686 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 LRRC8AQ8IWT6 810 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 TMEM131LA2VDJ0 1609 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 POTEMA6NI47 508 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 KIF28PB7ZC32 967 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 DPYSL4O14531 572 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 CELF2O95319 508 aaKnown RBP11.89□□□□□ -0.51
SCN1B-208ENST00000640135 EYA4O95677 639 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 RASSF7Q02833 373 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 NAALADL2Q58DX5 795 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 SFR1Q86XK3 245 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 INPP5FQ9Y2H2 1132 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 NR3C1P04150 777 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 CD58P19256 250 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 KCNJ6P48051 423 aa11.89□□□□□ -0.51
SCN1B-208ENST00000640135 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms