RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 DESI2Q9BSY9 194 aa17.51■□□□□ 0.39
CACNA1A-231ENST00000636816 GABBR1Q9UBS5 961 aa17.51■□□□□ 0.39
CACNA1A-231ENST00000636816 ZMYM2Q9UBW7 1377 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 PDXKO00764 312 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 CLIC2O15247 247 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 TGFB1I1O43294 461 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 STAM2O75886 525 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 TPM1P09493 284 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 TRIM14Q14142 442 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 PTPN14Q15678 1187 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 GNPTABQ3T906 1256 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 FKBP15Q5T1M5 1219 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 SWSAP1Q6NVH7 229 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 ANO5Q75V66 913 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 REXO1L1PQ8IX06 675 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 FAM178BQ8IXR5 827 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 FAM133AQ8N9E0 248 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 PCMTD1Q96MG8 357 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 TTYH3Q9C0H2 523 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 AGPAT5Q9NUQ2 364 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 SLC9A2Q9UBY0 812 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 CAPN11Q9UMQ6 739 aa17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 ZNFX1Q9P2E3 1918 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-231ENST00000636816 STBD1O95210 358 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 ACTR2P61160 394 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 ERVK-24P63145 666 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 XKR9Q5GH70 373 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 CYFIP1Q7L576 1253 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 EEPD1Q7L9B9 569 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 GPRC5CQ9NQ84 441 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 TYW1Q9NV66 732 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 SIK3Q9Y2K2 1263 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 NFASCO94856 1347 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 CETN3O15182 167 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 FECHP22830 423 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 PPP4R3CPQ6ZMV5 832 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 CCDC60Q8IWA6 550 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 TRIM59Q8IWR1 403 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 SMCR8Q8TEV9 937 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 CCDC51Q96ER9 411 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 CDHR1Q96JP9 859 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 SEL1LQ9UBV2 794 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 PPP2R2CQ9Y2T4 447 aa17.49■□□□□ 0.39
CACNA1A-231ENST00000636816 EPHB6O15197 1021 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 EIF3DO15371 548 aaKnown RBP eCLIP17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 CALUO43852 315 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 ICAM3P32942 547 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 CASP4P49662 377 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 KCNMA1Q12791 1236 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 ABHD15Q6UXT9 468 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 ZNF526Q8TF50 670 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 ZNF592Q92610 1267 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 MS4A4AQ96JQ5 239 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 FGD4Q96M96 766 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 CHP1Q99653 195 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 LUC7L2Q9Y383 392 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 SLC25A27O95847 323 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 NR3C1P04150 777 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 TRIM21P19474 475 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 EDNRBP24530 442 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 MARSP56192 900 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 SMAP1Q8IYB5 467 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 STRA6Q9BX79 667 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 ANKEF1Q9NU02 776 aa17.48■□□□□ 0.39
CACNA1A-231ENST00000636816 MYH9P35579 1960 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 A0A0U1RQJ8 604 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 SOCS7O14512 581 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 AKAP3O75969 853 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 GNA14O95837 355 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 PSAPP07602 524 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 SOX10P56693 466 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 WDR78Q5VTH9 848 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 WDR59Q6PJI9 974 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 OR8K1Q8NGG5 319 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 ATRIPQ8WXE1 791 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 CCDC43Q96MW1 224 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 NAA15Q9BXJ9 866 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 PORCNQ9H237 461 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 MMRN2Q9H8L6 949 aa17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 FAM207AQ9NSI2 230 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-231ENST00000636816 PPP1R37O75864 691 aa17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 ERVK-9P63128 1117 aa17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 MMP19Q99542 508 aa17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 DNAJC7Q99615 494 aa17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 NUP58Q9BVL2 599 aa17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 EFCC1Q9HA90 598 aa17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 GBA2Q9HCG7 927 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 MCM3APO60318 1980 aa17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 PLS3P13797 630 aa17.46■□□□□ 0.39
CACNA1A-231ENST00000636816 LRRC37A2A6NM11 1700 aa17.45■□□□□ 0.38
CACNA1A-231ENST00000636816 DNAJC25-GNG10A0A024R161 153 aa17.45■□□□□ 0.38
CACNA1A-231ENST00000636816 BTBD19C9JJ37 291 aa17.45■□□□□ 0.38
CACNA1A-231ENST00000636816 K7ENM7 598 aa17.45■□□□□ 0.38
CACNA1A-231ENST00000636816 PDHXO00330 501 aa17.45■□□□□ 0.38
CACNA1A-231ENST00000636816 CELF2O95319 508 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-231ENST00000636816 SUPT20HL2P0C7V6 817 aa17.45■□□□□ 0.38
CACNA1A-231ENST00000636816 ATP4AP20648 1035 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms