RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	PFKFB3	Q16875	520 aa	Predicted RBP	4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	QRICH1	Q2TAL8	776 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	CCDC181	Q5TID7	509 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	IQSEC1	Q6DN90	963 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	NSUN6	Q8TEA1	469 aa	Known RBP	4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	NUP133	Q8WUM0	1156 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	CLEC4D	Q8WXI8	215 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	CUL5	Q93034	780 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	SNX21	Q969T3	373 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	MAML3	Q96JK9	1138 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	TRERF1	Q96PN7	1200 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	RIC8A	Q9NPQ8	531 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	BARHL2	Q9NY43	387 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	CYP39A1	Q9NYL5	469 aa		4.1	□□□□□ -1.75
LGI1-222	ENST00000636754	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	KLF18	A0A0U1RQI7	1052 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	SMIM22	K7EJ46	135 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	SEPT4	O43236	478 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	PAX4	O43316	350 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	NMT2	O60551	498 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	CYP3A4	P08684	503 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	POLR2M	P0CAP2	368 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	HOXD8	P13378	290 aa	Predicted RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	MYH6	P13533	1939 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	PDIA3	P30101	505 aa	Known RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	FLT3LG	P49771	235 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	AKAP17A	Q02040	695 aa	Known RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	PRKCZ	Q05513	592 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	IK	Q13123	557 aa	Predicted RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	FZD5	Q13467	585 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	NTRK3	Q16288	839 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	ADCK5	Q3MIX3	580 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	SLC9C1	Q4G0N8	1177 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	INTS6L	Q5JSJ4	861 aa	Known RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	RNF207	Q6ZRF8	634 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754		Q6ZUG5	572 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	CCDC84	Q86UT8	332 aa	Predicted RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	ARRDC4	Q8NCT1	418 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	SMARCC2	Q8TAQ2	1214 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	GTF3C6	Q969F1	213 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	INTS4	Q96HW7	963 aa	Known RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	ABHD8	Q96I13	439 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	ZMYND12	Q9H0C1	365 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	R3HDML	Q9H3Y0	253 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	A1CF	Q9NQ94	594 aa	Known RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	ZNFX1	Q9P2E3	1918 aa	Known RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	CDV3	Q9UKY7	258 aa	Known RBP	4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	OGDHL	Q9ULD0	1010 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	LIMCH1	Q9UPQ0	1083 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	FAN1	Q9Y2M0	1017 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754	PTCH2	Q9Y6C5	1203 aa		4.09	□□□□□ -1.75
LGI1-222	ENST00000636754		A6NHS1	94 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754		A6NJY4	79 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	ZEB2	O60315	1214 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	DUSP11	O75319	330 aa	Known RBP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	EIF3J	O75822	258 aa	Known RBP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	SCG2	P13521	617 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	AKR1A1	P14550	325 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	GCFC2	P16383	781 aa	Known RBP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	CIITA	P33076	1130 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	ALDH5A1	P51649	535 aa	Predicted RBP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	PSMA6	P60900	246 aa	Known RBP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	SET	Q01105	290 aa	Predicted RBP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	GRM1	Q13255	1194 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	ZYX	Q15942	572 aa	Known RBP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	SLC4A8	Q2Y0W8	1093 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	GNPTAB	Q3T906	1256 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	PCNX4	Q63HM2	1172 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	KCTD1	Q719H9	257 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	UBE2Q1	Q7Z7E8	422 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	DPP9	Q86TI2	863 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	NCAPG2	Q86XI2	1143 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	CLEC10A	Q8IUN9	316 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	SPICE1	Q8N0Z3	855 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	ANKRD35	Q8N283	1001 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	RDM1	Q8NG50	284 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	RASGRP4	Q8TDF6	673 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	DDX11	Q96FC9	970 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	SRPK1	Q96SB4	655 aa	Known RBP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	SENP7	Q9BQF6	1050 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	PAGR1	Q9BTK6	254 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	KATNBL1	Q9H079	304 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	PORCN	Q9H237	461 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	C12orf49	Q9H741	205 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	SPC25	Q9HBM1	224 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	C6orf50	Q9HD87	102 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	FBXO28	Q9NVF7	368 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	FAM184B	Q9ULE4	1060 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	CNPY2	Q9Y2B0	182 aa		4.09	□□□□□ -1.76
LGI1-222	ENST00000636754	NFASC	O94856	1347 aa		4.08	□□□□□ -1.76
LGI1-222	ENST00000636754	KIAA1217	Q5T5P2	1943 aa		4.08	□□□□□ -1.76
LGI1-222	ENST00000636754	SLC35F4	A4IF30	521 aa		4.08	□□□□□ -1.76
LGI1-222	ENST00000636754	DNM1L	O00429	736 aa		4.08	□□□□□ -1.76
LGI1-222	ENST00000636754	CYTH3	O43739	400 aa		4.08	□□□□□ -1.76
LGI1-222	ENST00000636754	DNAJC6	O75061	913 aa		4.08	□□□□□ -1.76
LGI1-222	ENST00000636754	SSB	P05455	408 aa	Known RBP eCLIP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms