RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 USP17L13C9JLJ4 530 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 USP17L11C9JVI0 530 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 USP17L18D6R9N7 530 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 USP17L22D6RA61 530 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 USP17L17D6RBQ6 530 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 USP17L19D6RCP7 530 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 USP17L20D6RJB6 530 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 H0YGN5 161 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 INPP5BP32019 993 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 ATP1A2P50993 1020 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 USP17L24Q0WX57 530 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 TRADDQ15628 312 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 NAA35Q5VZE5 725 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 USP17L6PQ6QN14 398 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 MICALCLQ6ZW33 695 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 VPS36Q86VN1 386 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 SFR1Q86XK3 245 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 KLHL7Q8IXQ5 586 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 SYCE1Q8N0S2 351 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 LMBR1Q8WVP7 490 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 SEC14L1Q92503 715 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 REEP2Q9BRK0 252 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 COA1Q9GZY4 146 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 NFS1Q9Y697 457 aa15.89■□□□□ 0.13
CLN6-215ENST00000636674 ASTN1O14525 1302 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 MEIS2O14770 477 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 HLA-DOAP06340 250 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 SPATA31C1P0DKV0 1188 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 RPL13P26373 211 aaKnown RBP15.88■□□□□ 0.13
CLN6-215ENST00000636674 HSD17B3P37058 310 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 STAT3P40763 770 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 GTF2IP78347 998 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 ARHGAP4P98171 946 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 COL23A1Q86Y22 540 aaPredicted RBP15.88■□□□□ 0.13
CLN6-215ENST00000636674 METTL13Q8N6R0 699 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 C3orf20Q8ND61 904 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 MKL1Q969V6 931 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 TTC7AQ9ULT0 858 aaPredicted RBP15.88■□□□□ 0.13
CLN6-215ENST00000636674 DNM3Q9UQ16 869 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 NOC2LQ9Y3T9 749 aaKnown RBP15.88■□□□□ 0.13
CLN6-215ENST00000636674 PCDHA1Q9Y5I3 950 aa15.88■□□□□ 0.13
CLN6-215ENST00000636674 GOLGA6L10A6NI86 522 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 MEFVO15553 781 aaPredicted RBP15.87■□□□□ 0.13
CLN6-215ENST00000636674 CEP104O60308 925 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 AKAP3O75969 853 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 LIG3P49916 1009 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 GUCY1A3Q02108 690 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 BIRC3Q13489 604 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 MTMR3Q13615 1198 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 UAP1Q16222 522 aaPredicted RBP15.87■□□□□ 0.13
CLN6-215ENST00000636674 NFIL3Q16649 462 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 SKIDA1Q1XH10 827 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 CEP85LQ5SZL2 805 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 KAT2BQ92831 832 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 SLC35C1Q96A29 364 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 LENG9Q96B70 501 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 FAM20AQ96MK3 541 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 SAMM50Q9Y512 469 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 NCANO14594 1321 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 SART1O43290 800 aaKnown RBP15.87■□□□□ 0.13
CLN6-215ENST00000636674 FSBPO95073 299 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 NR3C1P04150 777 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 H2AFZP0C0S5 128 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 FERP16591 822 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 PTGER2P43116 358 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 HLTFQ14527 1009 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLN6-215ENST00000636674 ENOX2Q16206 610 aaKnown RBP15.87■□□□□ 0.13
CLN6-215ENST00000636674 H2AFVQ71UI9 128 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 CNPY4Q8N129 248 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 ZNF473Q8WTR7 871 aaKnown RBP15.87■□□□□ 0.13
CLN6-215ENST00000636674 SGIP1Q9BQI5 828 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 ZHX3Q9H4I2 956 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 RABEP2Q9H5N1 569 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 OLFML3Q9NRN5 406 aa15.87■□□□□ 0.13
CLN6-215ENST00000636674 KLRG2A4D1S0 409 aaPredicted RBP15.86■□□□□ 0.13
CLN6-215ENST00000636674 GCOM1H8Y6P7 765 aaPredicted RBP15.86■□□□□ 0.13
CLN6-215ENST00000636674 FAM107AO95990 144 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 MYZAPP0CAP1 466 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 CIITAP33076 1130 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 SREBF1P36956 1147 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 MMP14P50281 582 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 RNASE9P60153 205 aaKnown RBP15.86■□□□□ 0.13
CLN6-215ENST00000636674 RUFY4Q6ZNE9 571 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 MAATS1Q7Z4T9 603 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 CERS5Q8N5B7 392 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 OLIG1Q8TAK6 271 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 MYCBPAPQ8TBZ2 947 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 HES6Q96HZ4 224 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 USP40Q9NVE5 1235 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 NYAP2Q9P242 653 aa15.86■□□□□ 0.13
CLN6-215ENST00000636674 C6orf229H3BNL8 230 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 DDX3XO00571 662 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLN6-215ENST00000636674 EIF3DO15371 548 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLN6-215ENST00000636674 KIAA0754O94854 1291 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 FOSP01100 380 aaPredicted RBP15.85■□□□□ 0.13
CLN6-215ENST00000636674 SERPINB2P05120 415 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 PSMC6P62333 389 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 PABPC4Q13310 644 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLN6-215ENST00000636674 SPDYCQ5MJ68 293 aa15.85■□□□□ 0.13
CLN6-215ENST00000636674 AGBL2Q5U5Z8 902 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms