RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 SREBF1P36956 1147 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 TNFAIP2Q03169 654 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 NR5A1Q13285 461 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 CUL4BQ13620 913 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 TEX2Q8IWB9 1127 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 MED15Q96RN5 788 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 WDR11Q9BZH6 1224 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 SYNRGQ9UMZ2 1314 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 RBM47A0AV96 593 aaKnown RBP17.13■□□□□ 0.33
CLN8-209ENST00000635970 LRRC10BA6NIK2 292 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 RARBP10826 455 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 ARHGAP4P98171 946 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 GALNT17Q6IS24 598 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 RAD9BQ6WBX8 426 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 COPS5Q92905 334 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 NAPGQ99747 312 aaPredicted RBP17.13■□□□□ 0.33
CLN8-209ENST00000635970 EHMT1Q9H9B1 1298 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 MED4Q9NPJ6 270 aa17.13■□□□□ 0.33
CLN8-209ENST00000635970 CTAGE15A4D2H0 777 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 FAM205CA6NFA0 338 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 MSCO60682 206 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 PGK1P00558 417 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
CLN8-209ENST00000635970 CTAGE8P0CG41 777 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 KRT2P35908 639 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 LY6KQ17RY6 165 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 EARS2Q5JPH6 523 aaKnown RBP17.12■□□□□ 0.33
CLN8-209ENST00000635970 SPECC1Q5M775 1068 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 ZNF569Q5MCW4 686 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 CTAGE6Q86UF2 777 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 CTAGE4Q8IX94 777 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 ANKRD20A12PQ8NF67 263 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 CYP2W1Q8TAV3 490 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 SCFD2Q8WU76 684 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 CRYGNQ8WXF5 182 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 CRISPLD2Q9H0B8 497 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 CSRNP2Q9H175 543 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 RASSF4Q9H2L5 321 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 LZTFL1Q9NQ48 299 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 XPNPEP3Q9NQH7 507 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 GNEQ9Y223 722 aaKnown RBP17.12■□□□□ 0.33
CLN8-209ENST00000635970 PCDHB6Q9Y5E3 794 aa17.12■□□□□ 0.33
CLN8-209ENST00000635970 TFRCP02786 760 aaKnown RBP17.11■□□□□ 0.33
CLN8-209ENST00000635970 TXNP10599 105 aaKnown RBP17.11■□□□□ 0.33
CLN8-209ENST00000635970 ITGB5P18084 799 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 LMAN1P49257 510 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 HSP90B2PQ58FF3 399 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 HSP90AA4PQ58FG1 418 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 WDR93Q6P2C0 686 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 FAM71BQ8TC56 605 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 INPP4AQ96PE3 977 aaPredicted RBP17.11■□□□□ 0.33
CLN8-209ENST00000635970 VIPAS39Q9H9C1 493 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 OGDHLQ9ULD0 1010 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 MYADML2A6NDP7 307 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 TEX33O43247 280 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 EDIL3O43854 480 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 SORBS3O60504 671 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 TTLL4Q14679 1199 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 MTF1Q14872 753 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 PTPN21Q16825 1174 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 DUSP28Q4G0W2 176 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 IQSEC1Q6DN90 963 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 TLK2Q86UE8 772 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 TNFRSF25Q93038 417 aa17.11■□□□□ 0.33
CLN8-209ENST00000635970 LIMA1Q9UHB6 759 aaKnown RBP17.11■□□□□ 0.33
CLN8-209ENST00000635970 H3BQF6 201 aa17.1■□□□□ 0.33
CLN8-209ENST00000635970 DUSP11O75319 330 aaKnown RBP17.1■□□□□ 0.33
CLN8-209ENST00000635970 SP2Q02086 613 aa17.1■□□□□ 0.33
CLN8-209ENST00000635970 GRIN1Q05586 938 aa17.1■□□□□ 0.33
CLN8-209ENST00000635970 CCDC62Q6P9F0 684 aa17.1■□□□□ 0.33
CLN8-209ENST00000635970 PIK3AP1Q6ZUJ8 805 aa17.1■□□□□ 0.33
CLN8-209ENST00000635970 UBIAD1Q9Y5Z9 338 aa17.1■□□□□ 0.33
CLN8-209ENST00000635970 FAM86B1E9PN63 330 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 ADAMTS4O75173 837 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 STAM2O75886 525 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 FAM86B2P0C5J1 330 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 DPYDQ12882 1025 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 INF2Q27J81 1249 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 MCTP2Q6DN12 878 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 XRRA1Q6P2D8 792 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 DIS3LQ8TF46 1054 aaKnown RBP17.09■□□□□ 0.33
CLN8-209ENST00000635970 PAGE5Q96GU1 130 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 RPGRIP1Q96KN7 1286 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 PDE11AQ9HCR9 933 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 BRMS1Q9HCU9 246 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 CCDC194A0A1B0GVG4 234 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 C6orf222P0C671 652 aaPredicted RBP17.09■□□□□ 0.33
CLN8-209ENST00000635970 UBA1P22314 1058 aaKnown RBP17.09■□□□□ 0.33
CLN8-209ENST00000635970 MNX1P50219 401 aaPredicted RBP17.09■□□□□ 0.33
CLN8-209ENST00000635970 NONOQ15233 471 aaKnown RBP eCLIP17.09■□□□□ 0.33
CLN8-209ENST00000635970 KRT25Q7Z3Z0 450 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 IRX2Q9BZI1 471 aaPredicted RBP17.09■□□□□ 0.33
CLN8-209ENST00000635970 PKD2L1Q9P0L9 805 aa17.09■□□□□ 0.33
CLN8-209ENST00000635970 PUF60Q9UHX1 559 aaKnown RBP17.09■□□□□ 0.33
CLN8-209ENST00000635970 PPP1R3GB7ZBB8 358 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms