RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 GJB2P29033 226 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 MCM7P33993 719 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 FAM117BQ6P1L5 589 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.23■■□□□ 1.312e-8■□□□□ 8.6
CIRBP-246ENST00000628979 HERC6Q8IVU3 1022 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 NME8Q8N427 588 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 PPP1R16BQ96T49 567 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 ZBED2Q9BTP6 218 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 IFIH1Q9BYX4 1025 aaKnown RBP23.23■■□□□ 1.31
CIRBP-246ENST00000628979 ZNF576Q9H609 170 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 GINS2Q9Y248 185 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 PCDHA11Q9Y5I1 949 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 TRPV2Q9Y5S1 764 aa23.23■■□□□ 1.31
CIRBP-246ENST00000628979 SIP14410 1827 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 DDX11L8A8MPP1 907 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 KIF28PB7ZC32 967 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 EFCAB14O75071 495 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 C22orf31O95567 290 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 TXKP42681 527 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 LPIN1Q14693 890 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 ZNF174Q15697 407 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 MTERF2Q49AM1 385 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 KIAA0319LQ8IZA0 1049 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 GUCD1Q96NT3 240 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 SMC3Q9UQE7 1217 aa23.22■■□□□ 1.31
CIRBP-246ENST00000628979 PTPRSQ13332 1948 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 TMEM265A0A087WTH1 108 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 TMEM150BA6NC51 233 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 PSMC5P62195 406 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 XKR3Q5GH77 459 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 FBXO47Q5MNV8 452 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 NOSTRINQ8IVI9 506 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 SH2D3AQ9BRG2 576 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 CELF4Q9BZC1 486 aaKnown RBP23.21■■□□□ 1.31
CIRBP-246ENST00000628979 SLC28A3Q9HAS3 691 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 PCDHA12Q9UN75 941 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 LOXHD1Q8IVV2 1947 aa23.21■■□□□ 1.31
CIRBP-246ENST00000628979 MAGEB2O15479 319 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 TLL1O43897 1013 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 AMHP03971 560 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 CLCN3P51790 818 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 EPHA7Q15375 998 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 MCTP1Q6DN14 999 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 EFCAB12Q6NXP0 572 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 MYOCDQ8IZQ8 938 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 LRRC71Q8N4P6 559 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 APBB2Q92870 758 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 CDX2Q99626 313 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-246ENST00000628979 SUGCTQ9HAC7 445 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-246ENST00000628979 MICAL3Q7RTP6 2002 aa23.2■■□□□ 1.3
CIRBP-246ENST00000628979 VTNP04004 478 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 P4HBP07237 508 aaKnown RBP23.19■■□□□ 1.3
CIRBP-246ENST00000628979 CD52P31358 61 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 QARSP47897 775 aaKnown RBP23.19■■□□□ 1.3
CIRBP-246ENST00000628979 TBC1D8BQ0IIM8 1120 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 GRIN2CQ14957 1233 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 TTC38Q5R3I4 469 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 PPP2R2DQ66LE6 453 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 TSHZ1Q6ZSZ6 1077 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 MYLIPQ8WY64 445 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 DYDC2Q96IM9 177 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 TMEM60Q9H2L4 133 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 TTC12Q9H892 705 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-246ENST00000628979 CDHR5Q9HBB8 845 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 RGL1Q9NZL6 768 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 NOL7Q9UMY1 257 aaKnown RBP23.19■■□□□ 1.3
CIRBP-246ENST00000628979 AKT3Q9Y243 479 aa23.19■■□□□ 1.3
CIRBP-246ENST00000628979 H3BQV1 296 aa23.18■■□□□ 1.3
CIRBP-246ENST00000628979 UPP2O95045 317 aa23.18■■□□□ 1.3
CIRBP-246ENST00000628979 STBD1O95210 358 aa23.18■■□□□ 1.3
CIRBP-246ENST00000628979 CA3P07451 260 aa23.18■■□□□ 1.3
CIRBP-246ENST00000628979 TMOD1P28289 359 aa23.18■■□□□ 1.3
CIRBP-246ENST00000628979 CYP4A11Q02928 519 aa23.18■■□□□ 1.3
CIRBP-246ENST00000628979 CTTNQ14247 550 aaKnown RBP23.18■■□□□ 1.3
CIRBP-246ENST00000628979 PLA2G4FQ68DD2 849 aa23.18■■□□□ 1.3
CIRBP-246ENST00000628979 NIFKQ9BYG3 293 aaKnown RBP23.18■■□□□ 1.3
CIRBP-246ENST00000628979 AGO3Q9H9G7 860 aaKnown RBP23.18■■□□□ 1.3
CIRBP-246ENST00000628979 DKC1O60832 514 aaKnown RBP eCLIP23.17■■□□□ 1.3
CIRBP-246ENST00000628979 SPIRE1Q08AE8 756 aa23.17■■□□□ 1.3
CIRBP-246ENST00000628979 NBR1Q14596 966 aa23.17■■□□□ 1.3
CIRBP-246ENST00000628979 KIZQ2M2Z5 673 aa23.17■■□□□ 1.3
CIRBP-246ENST00000628979 TMEM266Q2M3C6 531 aa23.17■■□□□ 1.3
CIRBP-246ENST00000628979 TPH2Q8IWU9 490 aa23.17■■□□□ 1.3
CIRBP-246ENST00000628979 ZNF668Q96K58 619 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-246ENST00000628979 MTMR9Q96QG7 549 aa23.17■■□□□ 1.3
CIRBP-246ENST00000628979 MAP7D2Q96T17 732 aa23.17■■□□□ 1.3
CIRBP-246ENST00000628979 LXNQ9BS40 222 aa23.17■■□□□ 1.3
CIRBP-246ENST00000628979 WRAP73Q9P2S5 460 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-246ENST00000628979 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-246ENST00000628979 U2AF2P26368 475 aaKnown RBP eCLIP23.16■■□□□ 1.3
CIRBP-246ENST00000628979 PAK2Q13177 524 aa23.16■■□□□ 1.3
CIRBP-246ENST00000628979 TARBP2Q15633 366 aaKnown RBP23.16■■□□□ 1.3
CIRBP-246ENST00000628979 ANO5Q75V66 913 aa23.16■■□□□ 1.3
CIRBP-246ENST00000628979 OSMRQ99650 979 aa23.16■■□□□ 1.3
CIRBP-246ENST00000628979 EIF2AK1Q9BQI3 630 aaKnown RBP23.16■■□□□ 1.3
CIRBP-246ENST00000628979 CERS4Q9HA82 394 aa23.16■■□□□ 1.3
CIRBP-246ENST00000628979 PADI3Q9ULW8 664 aa23.16■■□□□ 1.3
CIRBP-246ENST00000628979 GJB5O95377 273 aa23.15■■□□□ 1.3
CIRBP-246ENST00000628979 NFX1Q12986 1120 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms