RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 H3BNC9 293 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 CYP3A7P24462 503 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 ANAPC15P60006 121 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 SCRN1Q12765 414 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 GPM6BQ13491 265 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 NPY5RQ15761 445 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 Q4G0T1 1027 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 GALNT17Q6IS24 598 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 FIBCD1Q8N539 461 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 IL27Q8NEV9 243 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 AIFM3Q96NN9 605 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 RC3H2Q9HBD1 1191 aaKnown RBP13.7□□□□□ -0.22
UBR1-212ENST00000627960 TPCN1Q9ULQ1 816 aa13.7□□□□□ -0.22
UBR1-212ENST00000627960 BDP1A6H8Y1 2624 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 TNFRSF10AO00220 468 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 PFKFB2O60825 505 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 CDKL5O76039 1030 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 C22orf31O95567 290 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 PAK2Q13177 524 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 FAM43BQ6ZT52 329 aaPredicted RBP13.69□□□□□ -0.22
UBR1-212ENST00000627960 CRIPAKQ8N1N5 446 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 ZNF689Q96CS4 500 aaPredicted RBP13.69□□□□□ -0.22
UBR1-212ENST00000627960 MRPL38Q96DV4 380 aaKnown RBP13.69□□□□□ -0.22
UBR1-212ENST00000627960 FAM167AQ96KS9 214 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 TEKT3Q9BXF9 490 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 SLKQ9H2G2 1235 aaPredicted RBP13.69□□□□□ -0.22
UBR1-212ENST00000627960 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 DISC1Q9NRI5 854 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 CEP131Q9UPN4 1083 aa13.69□□□□□ -0.22
UBR1-212ENST00000627960 ADGRA3Q8IWK6 1321 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 GAS7O60861 476 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 PSMD10O75832 226 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 DGKIO75912 1065 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 TDP2O95551 362 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 LINC00271P0C7V0 271 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 SFNP31947 248 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 BMPR1AP36894 532 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 KCNQ1P51787 676 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 JAK3P52333 1124 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 PTPROQ16827 1216 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 TMEM266Q2M3C6 531 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 LRCH2Q5VUJ6 765 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 TRMT1LQ7Z2T5 733 aaKnown RBP13.68□□□□□ -0.22
UBR1-212ENST00000627960 KRT25Q7Z3Z0 450 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 NPAS4Q8IUM7 802 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 MBOAT7Q96N66 472 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 UHRF1Q96T88 793 aaPredicted RBP13.68□□□□□ -0.22
UBR1-212ENST00000627960 TMX1Q9H3N1 280 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 UNC45AQ9H3U1 944 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 ERVK-5Q9HDB9 667 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 NRBP2Q9NSY0 501 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 KCNJ14Q9UNX9 436 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 GINS2Q9Y248 185 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 NOC2LQ9Y3T9 749 aaKnown RBP13.68□□□□□ -0.22
UBR1-212ENST00000627960 KIAA1671Q9BY89 1806 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 MYO7AQ13402 2215 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 ATG2AQ2TAZ0 1938 aa13.68□□□□□ -0.22
UBR1-212ENST00000627960 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 C5orf67F2Z3F1 127 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 MAGEB2O15479 319 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 CHMP2AO43633 222 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 ZNF862O60290 1169 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 OATP04181 439 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 RB1P06400 928 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 STAG3L1P0CL83 205 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 CRYBB1P53674 252 aaPredicted RBP13.67□□□□□ -0.22
UBR1-212ENST00000627960 AK2P54819 239 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 NFX1Q12986 1120 aaKnown RBP13.67□□□□□ -0.22
UBR1-212ENST00000627960 BTG3Q14201 252 aaPredicted RBP13.67□□□□□ -0.22
UBR1-212ENST00000627960 NONOQ15233 471 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBR1-212ENST00000627960 ANKRD1Q15327 319 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 ODR4Q5SWX8 454 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 MOXD1Q6UVY6 613 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 METTL13Q8N6R0 699 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 RDM1Q8NG50 284 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 TMEM40Q8WWA1 233 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 CLP1Q92989 425 aaKnown RBP13.67□□□□□ -0.22
UBR1-212ENST00000627960 GJA10Q969M2 543 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 PHF20Q9BVI0 1012 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 RWDD3Q9Y3V2 267 aa13.67□□□□□ -0.22
UBR1-212ENST00000627960 FNDC1Q4ZHG4 1894 aaPredicted RBP13.66□□□□□ -0.22
UBR1-212ENST00000627960 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.66□□□□□ -0.22
UBR1-212ENST00000627960 GPR32O75388 356 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 CTDNEP1O95476 244 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 VTNP04004 478 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 CTNNB1P35222 781 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 UGCGQ16739 394 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 INF2Q27J81 1249 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 EFCAB12Q6NXP0 572 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 B3GNT9Q6UX72 402 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 CMTR2Q8IYT2 770 aaKnown RBP13.66□□□□□ -0.22
UBR1-212ENST00000627960 LINC01465Q8N7H1 131 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 ST3GAL5Q9UNP4 418 aa13.66□□□□□ -0.22
UBR1-212ENST00000627960 XIRP2A4UGR9 3374 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 CCDC194A0A1B0GVG4 234 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 GPR182O15218 404 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 MGEA5O60502 916 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 EIF5BO60841 1220 aaKnown RBP13.65□□□□□ -0.22
UBR1-212ENST00000627960 DTNBO60941 627 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms