RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 SRCAPQ6ZRS2 3230 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 YBX3P16989 372 aaKnown RBP eCLIP21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 CCND2P30279 289 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 CYLC1P35663 651 aaPredicted RBP21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 SH3D19Q5HYK7 790 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 DCPSQ96C86 337 aaKnown RBP21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 CARD6Q9BX69 1037 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 A1CFQ9NQ94 594 aaKnown RBP21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 CYP39A1Q9NYL5 469 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 ARMCX3Q9UH62 379 aaPredicted RBP21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 FAM184BQ9ULE4 1060 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 ATP2A1O14983 1001 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 RARRES1P49788 294 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 CDK17Q00537 523 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 ELF2Q15723 593 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 FRMD5Q7Z6J6 570 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 HOXC10Q9NYD6 342 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 SEL1LQ9UBV2 794 aa21.61■■□□□ 1.05
CHRNA4-209ENST00000627000 CYP27A1Q02318 531 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 PDXDC1Q6P996 788 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 CACNA2D4Q7Z3S7 1137 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 SULF1Q8IWU6 871 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 CCDC170Q8IYT3 715 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 ACAD9Q9H845 621 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 GUCA1BQ9UMX6 200 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 MRFAP1Q9Y605 127 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 PAPPA2Q9BXP8 1791 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 DOCK5Q9H7D0 1870 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 LCTP09848 1927 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 RCCD1A6NED2 376 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 EIF3CLB5ME19 914 aaKnown RBP21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 RGS20O76081 388 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 NSUN6Q8TEA1 469 aaKnown RBP21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 EIF3CQ99613 913 aaKnown RBP21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 DBR1Q9UK59 544 aaKnown RBP21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 PCDHB13Q9Y5F0 798 aa21.6■■□□□ 1.05
CHRNA4-209ENST00000627000 ZNF263O14978 683 aa21.59■■□□□ 1.05
CHRNA4-209ENST00000627000 USO1O60763 962 aaKnown RBP21.59■■□□□ 1.05
CHRNA4-209ENST00000627000 RPL13P26373 211 aaKnown RBP21.59■■□□□ 1.05
CHRNA4-209ENST00000627000 YWHABP31946 246 aaKnown RBP21.59■■□□□ 1.05
CHRNA4-209ENST00000627000 ERCC6LQ2NKX8 1250 aa21.59■■□□□ 1.05
CHRNA4-209ENST00000627000 UTP14CQ5TAP6 766 aaKnown RBP21.59■■□□□ 1.05
CHRNA4-209ENST00000627000 SYT17Q9BSW7 474 aa21.59■■□□□ 1.05
CHRNA4-209ENST00000627000 TELO2Q9Y4R8 837 aa21.59■■□□□ 1.05
CHRNA4-209ENST00000627000 LYPLA2O95372 231 aa21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 POLR2FP61218 127 aaKnown RBP21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 DCAF17Q5H9S7 520 aaPredicted RBP21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 C9orf131Q5VYM1 1079 aa21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 XRRA1Q6P2D8 792 aa21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 RBM46Q8TBY0 533 aaKnown RBP21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 CCDC42Q96M95 316 aa21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 INPP4AQ96PE3 977 aaPredicted RBP21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 CEP72Q9P209 647 aa21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 WDR81Q562E7 1941 aa21.58■■□□□ 1.05
CHRNA4-209ENST00000627000 WDR64B1ANS9 1081 aa21.58■■□□□ 1.04
CHRNA4-209ENST00000627000 EIF4A3P38919 411 aaKnown RBP21.58■■□□□ 1.04
CHRNA4-209ENST00000627000 KRT83P78385 493 aa21.58■■□□□ 1.04
CHRNA4-209ENST00000627000 KIAA1328Q86T90 577 aa21.58■■□□□ 1.04
CHRNA4-209ENST00000627000 GPRASP2Q96D09 838 aa21.58■■□□□ 1.04
CHRNA4-209ENST00000627000 EDEM3Q9BZQ6 932 aa21.58■■□□□ 1.04
CHRNA4-209ENST00000627000 LACRTQ9GZZ8 138 aa21.58■■□□□ 1.04
CHRNA4-209ENST00000627000 BACH1O14867 736 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 EPB41P11171 864 aaKnown RBP21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 XRCC5P13010 732 aaKnown RBP21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 JAK3P52333 1124 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 KRT76Q01546 638 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 CCDC122Q5T0U0 273 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 PLA2G4FQ68DD2 849 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 NLRX1Q86UT6 975 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 C4orf19Q8IY42 314 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 STRA6Q9BX79 667 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 HAUS4Q9H6D7 363 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 TCEAL9Q9UHQ7 104 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 CSADQ9Y600 493 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 MYPNQ86TC9 1320 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 SLC16A3O15427 465 aaKnown RBP21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 PPP1R12BO60237 982 aaPredicted RBP21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 AFPP02771 609 aaKnown RBP21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 ACTN1P12814 892 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 NPEPPSP55786 919 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 PSMC5P62195 406 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 TCERG1LQ5VWI1 586 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 MOB2Q70IA6 237 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 MNS1Q8NEH6 495 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 JAKMIP2Q96AA8 810 aa21.57■■□□□ 1.04
CHRNA4-209ENST00000627000 LOC285556D6RIA3 1793 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 SORBS3O60504 671 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 PPP1R37O75864 691 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 KCNA2P16389 499 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 SLC9A1P19634 815 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 SFNP31947 248 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 DPY19L2P1Q6NXN4 242 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 SLC35C1Q96A29 364 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 BORCS6Q96GS4 357 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 CLMNQ96JQ2 1002 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 GANQ9H2C0 597 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 ELP3Q9H9T3 547 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 GPRC5CQ9NQ84 441 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 UBE4BO95155 1302 aa21.56■■□□□ 1.04
CHRNA4-209ENST00000627000 K7ENM7 598 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms