RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 SAFBQ15424 915 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMN2-214ENST00000626847 TAF11Q15544 211 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.14□□□□□ -0.95
SMN2-214ENST00000626847 RABL6Q3YEC7 729 aaPredicted RBP9.14□□□□□ -0.95
SMN2-214ENST00000626847 PABPC1LQ4VXU2 614 aaKnown RBP9.14□□□□□ -0.95
SMN2-214ENST00000626847 FBXW10Q5XX13 1052 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 TRIM46Q7Z4K8 759 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 MAATS1Q7Z4T9 603 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 ZNF804AQ7Z570 1209 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 PPFIBP1Q86W92 1011 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 WDR75Q8IWA0 830 aaKnown RBP9.14□□□□□ -0.95
SMN2-214ENST00000626847 SYCP3Q8IZU3 236 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 NLGN1Q8N2Q7 840 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 KLHDC4Q8TBB5 520 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 ZNF512BQ96KM6 892 aaPredicted RBP9.14□□□□□ -0.95
SMN2-214ENST00000626847 RPGRIP1Q96KN7 1286 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 NR1H4Q96RI1 486 aaPredicted RBP9.14□□□□□ -0.95
SMN2-214ENST00000626847 ACTR5Q9H9F9 607 aaPredicted RBP9.14□□□□□ -0.95
SMN2-214ENST00000626847 VCX3AQ9NNX9 186 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 DDX21Q9NR30 783 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMN2-214ENST00000626847 FKBP14Q9NWM8 211 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 ABI2Q9NYB9 513 aaPredicted RBP9.14□□□□□ -0.95
SMN2-214ENST00000626847 PYCARDQ9ULZ3 195 aa9.14□□□□□ -0.95
SMN2-214ENST00000626847 MRPL11Q9Y3B7 192 aaKnown RBP9.14□□□□□ -0.95
SMN2-214ENST00000626847 TTC21AQ8NDW8 1320 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 AXIN1O15169 862 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 MGRN1O60291 552 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 MAN1A2O60476 641 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 NPTXRO95502 500 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 STAMBPO95630 424 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 RPN1P04843 607 aaKnown RBP9.13□□□□□ -0.95
SMN2-214ENST00000626847 POLR3DP05423 398 aaPredicted RBP9.13□□□□□ -0.95
SMN2-214ENST00000626847 ATP5JP18859 108 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 CHRNA5P30532 468 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 IRS1P35568 1242 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 SOX10P56693 466 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 AKAP17AQ02040 695 aaKnown RBP9.13□□□□□ -0.95
SMN2-214ENST00000626847 PI16Q6UXB8 463 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 CRELD2Q6UXH1 353 aaPredicted RBP9.13□□□□□ -0.95
SMN2-214ENST00000626847 RIPOR1Q6ZS17 1223 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 CCDC121Q6ZUS5 278 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 MYPNQ86TC9 1320 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 TIAM2Q8IVF5 1701 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 CRACR2BQ8N4Y2 399 aaPredicted RBP9.13□□□□□ -0.95
SMN2-214ENST00000626847 CCDC155Q8N6L0 562 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 CCDC89Q8N998 374 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 HNRNPLLQ8WVV9 542 aaKnown RBP9.13□□□□□ -0.95
SMN2-214ENST00000626847 CDKL2Q92772 493 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 PMEPA1Q969W9 287 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 SNF8Q96H20 258 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 CCT7Q99832 543 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 C12orf49Q9H741 205 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 PARVBQ9HBI1 364 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 ORC3Q9UBD5 711 aaPredicted RBP9.13□□□□□ -0.95
SMN2-214ENST00000626847 DDX20Q9UHI6 824 aaKnown RBP9.13□□□□□ -0.95
SMN2-214ENST00000626847 DSEQ9UL01 958 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 EXOC6BQ9Y2D4 811 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 PCDHB2Q9Y5E7 798 aa9.13□□□□□ -0.95
SMN2-214ENST00000626847 MEGF6O75095 1541 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 GAKO14976 1311 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 GTPBP10A4D1E9 387 aaKnown RBP9.12□□□□□ -0.95
SMN2-214ENST00000626847 M0QX08 132 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 MAP2K7O14733 419 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 PRC1O43663 620 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 SNX2O60749 519 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 SMIM24O75264 130 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 TBC1D8O95759 1140 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 EIF2S1P05198 315 aaKnown RBP9.12□□□□□ -0.95
SMN2-214ENST00000626847 RBP3P10745 1247 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 GNAT1P11488 350 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 GNAT2P19087 354 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 ATP5DP30049 168 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 ALDH3A1P30838 453 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 GNL1P36915 607 aaPredicted RBP9.12□□□□□ -0.95
SMN2-214ENST00000626847 PDE1BQ01064 536 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 NMIQ13287 307 aaPredicted RBP9.12□□□□□ -0.95
SMN2-214ENST00000626847 PPP2R5BQ15173 497 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 PCNX4Q63HM2 1172 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 MPRIPQ6WCQ1 1025 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 SLC15A3Q8IY34 581 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 CARNMT1Q8N4J0 409 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 ZSCAN1Q8NBB4 408 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 TNIP2Q8NFZ5 429 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 SMARCC2Q8TAQ2 1214 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 CCSER2Q9H7U1 834 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 SPC25Q9HBM1 224 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 EPB41L4AQ9HCS5 686 aaPredicted RBP9.12□□□□□ -0.95
SMN2-214ENST00000626847 NPHS2Q9NP85 383 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 SLC39A2Q9NP94 309 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 GALNT8Q9NY28 637 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 HESX1Q9UBX0 185 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 DNAI1Q9UI46 699 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 TTC7AQ9ULT0 858 aaPredicted RBP9.12□□□□□ -0.95
SMN2-214ENST00000626847 SCAF8Q9UPN6 1271 aaKnown RBP9.12□□□□□ -0.95
SMN2-214ENST00000626847 TRAF3IP3Q9Y228 551 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 R3HDM2Q9Y2K5 976 aaKnown RBP9.12□□□□□ -0.95
SMN2-214ENST00000626847 CAPN7Q9Y6W3 813 aa9.12□□□□□ -0.95
SMN2-214ENST00000626847 SYCE3A1L190 88 aa9.11□□□□□ -0.95
SMN2-214ENST00000626847 DYTNA2CJ06 578 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms