RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CCDC113Q9H0I3 377 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 RXFP1Q9HBX9 757 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 DDX21Q9NR30 783 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS11-209ENST00000622309 NMRK1Q9NWW6 199 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 R3HDM2Q9Y2K5 976 aaKnown RBP8.56□□□□□ -1.04
VPS11-209ENST00000622309 PLCH1Q4KWH8 1693 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 LSM1O15116 133 aaKnown RBP8.56□□□□□ -1.04
VPS11-209ENST00000622309 AKR1B10O60218 316 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 ETS2P15036 469 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 PTPREP23469 700 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 CASP1P29466 404 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 CLCN2P51788 898 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 GRIN1Q05586 938 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 EN1Q05925 392 aaPredicted RBP8.56□□□□□ -1.04
VPS11-209ENST00000622309 KPNB1Q14974 876 aaKnown RBP8.56□□□□□ -1.04
VPS11-209ENST00000622309 DDB1Q16531 1140 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 CFAP157Q5JU67 520 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 EIF1ADQ8N9N8 165 aaKnown RBP8.56□□□□□ -1.04
VPS11-209ENST00000622309 ZNF333Q96JL9 665 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 SIKE1Q9BRV8 207 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 AGPAT5Q9NUQ2 364 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 MAP3K2Q9Y2U5 619 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 ARL2BPQ9Y2Y0 163 aa8.56□□□□□ -1.04
VPS11-209ENST00000622309 A0A1W2PQC6 194 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 ITGA2BP08514 1039 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 HOXD12P35452 270 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 KLC3Q6P597 504 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 CCDC65Q8IXS2 484 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 ANKRD13CQ8N6S4 541 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 AZIN2Q96A70 460 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 ABHD8Q96I13 439 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 TLR10Q9BXR5 811 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 FAM114A2Q9NRY5 505 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 SUCLA2Q9P2R7 463 aaPredicted RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 RWDD2AQ9UIY3 292 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 IVNS1ABPQ9Y6Y0 642 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 PXDNLA1KZ92 1463 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 SMIM23A6NLE4 172 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 ASLP04424 464 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 UBTFL6P0CB48 400 aaPredicted RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 BCRP11274 1271 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 SCG2P13521 617 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 MAGEA1P43355 309 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 CHADLQ6NUI6 762 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 VSIG1Q86XK7 387 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 DDX42Q86XP3 938 aaKnown RBP eCLIP8.55□□□□□ -1.04
VPS11-209ENST00000622309 AGGF1Q8N302 714 aaeCLIP8.55□□□□□ -1.04
VPS11-209ENST00000622309 ATXN2LQ8WWM7 1075 aaKnown RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 NELFBQ8WX92 580 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 NCSTNQ92542 709 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 PPP2R3CQ969Q6 453 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 TLCD1Q96CP7 247 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 VMP1Q96GC9 406 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 OLFM3Q96PB7 478 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 DCLRE1BQ9H816 532 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 GRID2IPA4D2P6 1211 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 TMEM247A6NEH6 219 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 LGALS16A8MUM7 142 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 P4HA2O15460 535 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 RGS16O15492 202 aaPredicted RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 BUB1O43683 1085 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 KRT38O76015 456 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 ZCCHC18P0CG32 403 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 SERPINB3P29508 390 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 IARSP41252 1262 aaKnown RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 SKIV2L2P42285 1042 aaKnown RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 ADARP55265 1226 aaKnown RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 ERVK-9P63128 1117 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 PLOD1Q02809 727 aaPredicted RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 LMNB2Q03252 620 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 RNASELQ05823 741 aaKnown RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 PARP6Q2NL67 630 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.55□□□□□ -1.04
VPS11-209ENST00000622309 INTS8Q75QN2 995 aaKnown RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 SCUBE1Q8IWY4 988 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 HAPLN3Q96S86 360 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 KLHL14Q9P2G3 628 aa8.55□□□□□ -1.04
VPS11-209ENST00000622309 FBXO2Q9UK22 296 aaPredicted RBP8.55□□□□□ -1.04
VPS11-209ENST00000622309 NFAT5O94916 1531 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 O00370 1275 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 PTK7Q13308 1070 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 TYW1BQ6NUM6 668 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 SRCAPQ6ZRS2 3230 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 FAM47EQ6ZV65 393 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 LARGE2Q8N3Y3 721 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 FITM2Q8N6M3 262 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 ENDOVQ8N8Q3 282 aaKnown RBP8.54□□□□□ -1.04
VPS11-209ENST00000622309 SCG3Q8WXD2 468 aaKnown RBP8.54□□□□□ -1.04
VPS11-209ENST00000622309 PAGE5Q96GU1 130 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 FGFR1OP2Q9NVK5 253 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 ZNF180Q9UJW8 692 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 TMED5Q9Y3A6 229 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 A0A0J9YVX5 310 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 TRIM64CA6NLI5 447 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 ATP5HO75947 161 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 UNC5CO95185 931 aa8.54□□□□□ -1.04
VPS11-209ENST00000622309 FGFR1OPO95684 399 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms