RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 TMEM192Q8IY95 271 aa23.82■■□□□ 1.4
PMPCA-212ENST00000622209 MBOAT7Q96N66 472 aa23.82■■□□□ 1.4
PMPCA-212ENST00000622209 SAMD11Q96NU1 681 aa23.82■■□□□ 1.4
PMPCA-212ENST00000622209 ENPP3O14638 875 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 COL9A1P20849 921 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 GUCY1B3Q02153 619 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 CUL4AQ13619 759 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 PLCB4Q15147 1175 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 PTPROQ16827 1216 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 FBXO47Q5MNV8 452 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 PPP4R3AQ6IN85 833 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 TRAPPC12Q8WVT3 735 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 MRPL38Q96DV4 380 aaKnown RBP23.81■■□□□ 1.4
PMPCA-212ENST00000622209 UBE2ZQ9H832 354 aaPredicted RBP23.81■■□□□ 1.4
PMPCA-212ENST00000622209 NCOR1O75376 2440 aa23.81■■□□□ 1.4
PMPCA-212ENST00000622209 H3BNC9 293 aa23.8■■□□□ 1.4
PMPCA-212ENST00000622209 DHX15O43143 795 aaKnown RBP23.8■■□□□ 1.4
PMPCA-212ENST00000622209 GCFC2P16383 781 aaKnown RBP23.8■■□□□ 1.4
PMPCA-212ENST00000622209 STAT5BP51692 787 aa23.8■■□□□ 1.4
PMPCA-212ENST00000622209 MRPS6P82932 125 aaKnown RBP23.8■■□□□ 1.4
PMPCA-212ENST00000622209 TMEM62Q0P6H9 643 aa23.8■■□□□ 1.4
PMPCA-212ENST00000622209 LETM2Q2VYF4 491 aa23.8■■□□□ 1.4
PMPCA-212ENST00000622209 FIBCD1Q8N539 461 aa23.8■■□□□ 1.4
PMPCA-212ENST00000622209 UIMC1Q96RL1 719 aa23.8■■□□□ 1.4
PMPCA-212ENST00000622209 FOXP1Q9H334 677 aaPredicted RBP23.8■■□□□ 1.4
PMPCA-212ENST00000622209 SMC3Q9UQE7 1217 aa23.8■■□□□ 1.4
PMPCA-212ENST00000622209 TCF20Q9UGU0 1960 aaKnown RBP23.8■■□□□ 1.4
PMPCA-212ENST00000622209 COL4A4P53420 1690 aaPredicted RBP23.79■■□□□ 1.4
PMPCA-212ENST00000622209 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.79■■□□□ 1.4
PMPCA-212ENST00000622209 DDX39AO00148 427 aaKnown RBP23.79■■□□□ 1.4
PMPCA-212ENST00000622209 MSH4O15457 936 aa23.79■■□□□ 1.4
PMPCA-212ENST00000622209 TDP2O95551 362 aa23.79■■□□□ 1.4
PMPCA-212ENST00000622209 KCNA5P22460 613 aa23.79■■□□□ 1.4
PMPCA-212ENST00000622209 GJB2P29033 226 aa23.79■■□□□ 1.4
PMPCA-212ENST00000622209 EARS2Q5JPH6 523 aaKnown RBP23.79■■□□□ 1.4
PMPCA-212ENST00000622209 PLPPR4Q7Z2D5 763 aa23.79■■□□□ 1.4
PMPCA-212ENST00000622209 SNX21Q969T3 373 aa23.79■■□□□ 1.4
PMPCA-212ENST00000622209 AGO3Q9H9G7 860 aaKnown RBP23.79■■□□□ 1.4
PMPCA-212ENST00000622209 DDX25Q9UHL0 483 aaKnown RBP23.79■■□□□ 1.4
PMPCA-212ENST00000622209 RAPGEFL1Q9UHV5 662 aa23.79■■□□□ 1.4
PMPCA-212ENST00000622209 ATG7O95352 703 aa23.78■■□□□ 1.4
PMPCA-212ENST00000622209 CD52P31358 61 aa23.78■■□□□ 1.4
PMPCA-212ENST00000622209 IER5Q5VY09 327 aa23.78■■□□□ 1.4
PMPCA-212ENST00000622209 TSHZ1Q6ZSZ6 1077 aa23.78■■□□□ 1.4
PMPCA-212ENST00000622209 SLC5A5Q92911 643 aa23.78■■□□□ 1.4
PMPCA-212ENST00000622209 TNPO1Q92973 898 aaKnown RBP23.78■■□□□ 1.4
PMPCA-212ENST00000622209 RIT2Q99578 217 aa23.78■■□□□ 1.4
PMPCA-212ENST00000622209 POTEB3A0JP26 581 aa23.77■■□□□ 1.4
PMPCA-212ENST00000622209 CCNT1O60563 726 aaKnown RBP23.77■■□□□ 1.4
PMPCA-212ENST00000622209 CTNNB1P35222 781 aa23.77■■□□□ 1.4
PMPCA-212ENST00000622209 KRT76Q01546 638 aa23.77■■□□□ 1.4
PMPCA-212ENST00000622209 ZNF746Q6NUN9 644 aaPredicted RBP23.77■■□□□ 1.4
PMPCA-212ENST00000622209 POTEBQ6S5H4 581 aa23.77■■□□□ 1.4
PMPCA-212ENST00000622209 BANK1Q8NDB2 785 aa23.77■■□□□ 1.4
PMPCA-212ENST00000622209 TCEAL9Q9UHQ7 104 aa23.77■■□□□ 1.4
PMPCA-212ENST00000622209 PCDHA2Q9Y5H9 948 aa23.77■■□□□ 1.4
PMPCA-212ENST00000622209 FAM205CA6NFA0 338 aa23.76■■□□□ 1.39
PMPCA-212ENST00000622209 K7ELQ4 463 aaPredicted RBP23.76■■□□□ 1.39
PMPCA-212ENST00000622209 BACH1O14867 736 aa23.76■■□□□ 1.39
PMPCA-212ENST00000622209 CCNE2O96020 404 aa23.76■■□□□ 1.39
PMPCA-212ENST00000622209 TRPV2Q9Y5S1 764 aa23.76■■□□□ 1.39
PMPCA-212ENST00000622209 MICAL3Q7RTP6 2002 aa23.76■■□□□ 1.39
PMPCA-212ENST00000622209 M0QZ92 97 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 BMPR1AP36894 532 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 GNL2Q13823 731 aaKnown RBP23.75■■□□□ 1.39
PMPCA-212ENST00000622209 LEXMQ3ZCV2 418 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 TIGD5Q53EQ6 642 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 TCEAL5Q5H9L2 206 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 MTHFD1LQ6UB35 978 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 ABHD15Q6UXT9 468 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 EP400NLQ6ZTU2 488 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 RTN4RL1Q86UN2 441 aaPredicted RBP23.75■■□□□ 1.39
PMPCA-212ENST00000622209 SMAP1Q8IYB5 467 aaPredicted RBP23.75■■□□□ 1.39
PMPCA-212ENST00000622209 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.75■■□□□ 1.39
PMPCA-212ENST00000622209 ETNPPLQ8TBG4 499 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 LINC01599Q8WXQ3 324 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 INTS4Q96HW7 963 aaKnown RBP23.75■■□□□ 1.39
PMPCA-212ENST00000622209 FAM20AQ96MK3 541 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 TEKT3Q9BXF9 490 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 EPHX3Q9H6B9 360 aa23.75■■□□□ 1.39
PMPCA-212ENST00000622209 IGKV6D-21A0A0A0MT36 114 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 TBX3O15119 743 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 SLC37A4O43826 429 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 GAS7O60861 476 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 RPLP2P05387 115 aaKnown RBP23.74■■□□□ 1.39
PMPCA-212ENST00000622209 U2AF2P26368 475 aaKnown RBP eCLIP23.74■■□□□ 1.39
PMPCA-212ENST00000622209 BTG3Q14201 252 aaPredicted RBP23.74■■□□□ 1.39
PMPCA-212ENST00000622209 LRCH2Q5VUJ6 765 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 MIS18BP1Q6P0N0 1132 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 C1QTNF1Q9BXJ1 281 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 CELF4Q9BZC1 486 aaKnown RBP23.74■■□□□ 1.39
PMPCA-212ENST00000622209 KCNMB3Q9NPA1 279 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 PADI3Q9ULW8 664 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 ADGRA3Q8IWK6 1321 aa23.74■■□□□ 1.39
PMPCA-212ENST00000622209 H3BQ06 376 aaPredicted RBP23.73■■□□□ 1.39
PMPCA-212ENST00000622209 PSMD10O75832 226 aa23.73■■□□□ 1.39
PMPCA-212ENST00000622209 KLRC1P26715 233 aa23.73■■□□□ 1.39
PMPCA-212ENST00000622209 FAM160B1Q5W0V3 765 aa23.73■■□□□ 1.39
PMPCA-212ENST00000622209 SWSAP1Q6NVH7 229 aa23.73■■□□□ 1.39
PMPCA-212ENST00000622209 NOSTRINQ8IVI9 506 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms