RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PCDHA1Q9Y5I3 950 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 COL11A1P12107 1806 aaPredicted RBP19.23■□□□□ 0.67
FAM3A-222ENST00000621967 MCM3P25205 808 aa19.22■□□□□ 0.67
FAM3A-222ENST00000621967 KIF11P52732 1056 aa19.22■□□□□ 0.67
FAM3A-222ENST00000621967 OAZ1P54368 228 aa19.22■□□□□ 0.67
FAM3A-222ENST00000621967 MYOCDQ8IZQ8 938 aa19.22■□□□□ 0.67
FAM3A-222ENST00000621967 GLIS3Q8NEA6 775 aa19.22■□□□□ 0.67
FAM3A-222ENST00000621967 TRIM58Q8NG06 486 aa19.22■□□□□ 0.67
FAM3A-222ENST00000621967 NT5C3AQ9H0P0 336 aa19.22■□□□□ 0.67
FAM3A-222ENST00000621967 FAM207AQ9NSI2 230 aaPredicted RBP19.22■□□□□ 0.67
FAM3A-222ENST00000621967 USO1O60763 962 aaKnown RBP19.21■□□□□ 0.67
FAM3A-222ENST00000621967 MAP2K2P36507 400 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 TMEM132BQ14DG7 1078 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 TXLNBQ8N3L3 684 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 REPS2Q8NFH8 660 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 AGBL1Q96MI9 1066 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 TEX13BQ9BXU2 312 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 IFIH1Q9BYX4 1025 aaKnown RBP19.21■□□□□ 0.67
FAM3A-222ENST00000621967 GLT8D2Q9H1C3 349 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 PSTPIP2Q9H939 334 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 PCDHA13Q9Y5I0 950 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 ZNF536O15090 1300 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 MACROD2A1Z1Q3 448 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 GCLCP48506 637 aaPredicted RBP19.21■□□□□ 0.67
FAM3A-222ENST00000621967 SNRNP48Q6IEG0 339 aaKnown RBP19.21■□□□□ 0.67
FAM3A-222ENST00000621967 ZNF572Q7Z3I7 529 aaPredicted RBP19.21■□□□□ 0.67
FAM3A-222ENST00000621967 MMRN2Q9H8L6 949 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 VIPAS39Q9H9C1 493 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 ADAM21Q9UKJ8 722 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 ZNF214Q9UL59 606 aaPredicted RBP19.21■□□□□ 0.67
FAM3A-222ENST00000621967 PCDHA12Q9UN75 941 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 RABGAP1Q9Y3P9 1069 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 JRKLQ9Y4A0 524 aa19.21■□□□□ 0.67
FAM3A-222ENST00000621967 LRRC53A6NM62 1247 aa19.2■□□□□ 0.66
FAM3A-222ENST00000621967 PJA2O43164 708 aa19.2■□□□□ 0.66
FAM3A-222ENST00000621967 ALDH1A1P00352 501 aa19.2■□□□□ 0.66
FAM3A-222ENST00000621967 TAL1P17542 331 aaPredicted RBP19.2■□□□□ 0.66
FAM3A-222ENST00000621967 EIF4A3P38919 411 aaKnown RBP19.2■□□□□ 0.66
FAM3A-222ENST00000621967 FKBP3Q00688 224 aaKnown RBP19.2■□□□□ 0.66
FAM3A-222ENST00000621967 LRRC41Q15345 812 aa19.2■□□□□ 0.66
FAM3A-222ENST00000621967 ASTE1Q2TB18 679 aaPredicted RBP19.2■□□□□ 0.66
FAM3A-222ENST00000621967 FAM26FQ5R3K3 315 aa19.2■□□□□ 0.66
FAM3A-222ENST00000621967 PDXDC1Q6P996 788 aa19.2■□□□□ 0.66
FAM3A-222ENST00000621967 MBOAT7Q96N66 472 aa19.2■□□□□ 0.66
FAM3A-222ENST00000621967 BTBD7Q9P203 1132 aa19.2■□□□□ 0.66
FAM3A-222ENST00000621967 LRRIQ3A6PVS8 624 aaPredicted RBP19.19■□□□□ 0.66
FAM3A-222ENST00000621967 PDE2AO00408 941 aaPredicted RBP19.19■□□□□ 0.66
FAM3A-222ENST00000621967 ATP2A1O14983 1001 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 ALAS1P13196 640 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 PRLRP16471 622 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 STAT3P40763 770 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 ITIH3Q06033 890 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
FAM3A-222ENST00000621967 CAPZA3Q96KX2 299 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 CEP63Q96MT8 703 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 ZFYVE28Q9HCC9 887 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 KCNMB3Q9NPA1 279 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 PANK4Q9NVE7 773 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 CALCOCO1Q9P1Z2 691 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 SNX12Q9UMY4 172 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 PCDHA2Q9Y5H9 948 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 COL4A3BPQ9Y5P4 624 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 CAPN6Q9Y6Q1 641 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 CYP3A7-CYP3A51PA0A087WV96 503 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 SSU72P8A0A1W2PR75 194 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 TACC1O75410 805 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 CYP3A7P24462 503 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 MARSP56192 900 aaKnown RBP19.19■□□□□ 0.66
FAM3A-222ENST00000621967 KCNMA1Q12791 1236 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 RRAGAQ7L523 313 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 SPATC1LQ9H0A9 340 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 HOMER2Q9NSB8 354 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 RBPJLQ9UBG7 517 aa19.19■□□□□ 0.66
FAM3A-222ENST00000621967 ZNF185O15231 689 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 PEX10O60683 326 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 USP11P51784 963 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 MAP9Q49MG5 647 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 IQCEQ6IPM2 695 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 POTEEQ6S8J3 1075 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 MOXD1Q6UVY6 613 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 ZC3H3Q8IXZ2 948 aaKnown RBP19.18■□□□□ 0.66
FAM3A-222ENST00000621967 ANKRD13CQ8N6S4 541 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 NEK11Q8NG66 645 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 GJA10Q969M2 543 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 TXNRD2Q9NNW7 524 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 MRPL11Q9Y3B7 192 aaKnown RBP19.18■□□□□ 0.66
FAM3A-222ENST00000621967 THSD7BQ9C0I4 1608 aa19.18■□□□□ 0.66
FAM3A-222ENST00000621967 RBAK-RBAKDNI3L0D1 243 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 GYS2P54840 703 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 ERVK-9P63128 1117 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 HGSNATQ68CP4 663 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 CREG2Q8IUH2 290 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 FAM71BQ8TC56 605 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 SYN2Q92777 582 aaPredicted RBP19.17■□□□□ 0.66
FAM3A-222ENST00000621967 ACBD3Q9H3P7 528 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 MED4Q9NPJ6 270 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 JADE2Q9NQC1 790 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 BMP2KQ9NSY1 1161 aaPredicted RBP19.17■□□□□ 0.66
FAM3A-222ENST00000621967 CEP72Q9P209 647 aa19.17■□□□□ 0.66
FAM3A-222ENST00000621967 PCNTO95613 3336 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms