RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 IFI16Q16666 785 aaKnown RBP9.87□□□□□ -0.83
GGA3-222ENST00000621217 VCXQ9H320 206 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 MAGEF1Q9HAY2 307 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 ZNF446Q9NWS9 450 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 CCDC160A6NGH7 325 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 YDJCA8MPS7 323 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 RNF40O75150 1001 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 PALMO75781 387 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 TRIM49P0CI25 452 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 TRIM49CP0CI26 452 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 PEX3P56589 373 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 OSTNP61366 133 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 TNNC1P63316 161 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 MKRN4PQ13434 485 aaPredicted RBP9.87□□□□□ -0.83
GGA3-222ENST00000621217 ZKSCAN8Q15776 578 aaPredicted RBP9.87□□□□□ -0.83
GGA3-222ENST00000621217 NAALADL2Q58DX5 795 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 PPM1KQ8N3J5 372 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 STMN4Q9H169 189 aaPredicted RBP9.87□□□□□ -0.83
GGA3-222ENST00000621217 SEMA6BQ9H3T3 888 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 VCPKMTQ9H867 229 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 ASTN2O75129 1339 aaPredicted RBP9.87□□□□□ -0.83
GGA3-222ENST00000621217 NMT1P30419 496 aaKnown RBP9.87□□□□□ -0.83
GGA3-222ENST00000621217 TBX2Q13207 712 aaPredicted RBP9.87□□□□□ -0.83
GGA3-222ENST00000621217 KCNB1Q14721 858 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 GNPTABQ3T906 1256 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 TTI2Q6NXR4 508 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 TBC1D31Q96DN5 1066 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 PPP1R12CQ9BZL4 782 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 SUDS3Q9H7L9 328 aaPredicted RBP9.87□□□□□ -0.83
GGA3-222ENST00000621217 STIM2Q9P246 746 aa9.87□□□□□ -0.83
GGA3-222ENST00000621217 RSPH10B2B2RC85 870 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 SPOPO43791 374 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 HEXIM1O94992 359 aaKnown RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 MYL1P05976 194 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 RSPH10BP0C881 870 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 PLA2G4AP47712 749 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 VPS41P49754 854 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 NT5DC1Q5TFE4 455 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 FAM160B2Q86V87 743 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 FAM186BQ8IYM0 893 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 MRRFQ96E11 262 aaKnown RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 CAPS2Q9BXY5 557 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 MTFR1LQ9H019 292 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 KBTBD4Q9NVX7 518 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 POLGP54098 1239 aaPredicted RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 SNCBQ16143 134 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 TSNAXIP1Q2TAA8 658 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 CCDC38Q502W7 563 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 ZC2HC1CQ53FD0 456 aaPredicted RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 TADA2BQ86TJ2 420 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 KIAA0895Q8NCT3 520 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 MPHOSPH6Q99547 160 aaKnown RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 EIF3CLB5ME19 914 aaKnown RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 KRIT1O00522 736 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 HNRNPDLO14979 420 aaKnown RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 KRT19P08727 400 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 SLC9A1P19634 815 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 KCTD2Q14681 263 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 CYFIP1Q7L576 1253 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 RETREG2Q8NC44 543 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 PURBQ96QR8 312 aaKnown RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 EIF3CQ99613 913 aaKnown RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 SELENOSQ9BQE4 189 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 PRM3Q9NNZ6 103 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 CHORDC1Q9UHD1 332 aaPredicted RBP9.86□□□□□ -0.83
GGA3-222ENST00000621217 NFU1Q9UMS0 254 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 FHOD1Q9Y613 1164 aa9.86□□□□□ -0.83
GGA3-222ENST00000621217 NFIBO00712 420 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 PPFIA4O75335 1185 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 AFPP02771 609 aaKnown RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 H2AFZP0C0S5 128 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 TCP1P17987 556 aaKnown RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 CAP2P40123 477 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 USP14P54578 494 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 LRRC63Q05C16 580 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 SEPT6Q14141 434 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 NPY5RQ15761 445 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 GJB7Q6PEY0 223 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 H2AFVQ71UI9 128 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 SH3RF1Q7Z6J0 888 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 CCDC170Q8IYT3 715 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 GUF1Q8N442 669 aaKnown RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 TTC16Q8NEE8 873 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 COG1Q8WTW3 980 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 POMGNT1Q8WZA1 660 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 N4BP2L2Q92802 583 aaPredicted RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 SLC10A4Q96EP9 437 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 EIF2AK1Q9BQI3 630 aaKnown RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 TAF1P21675 1872 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 ATRNO75882 1429 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 A0A1W2PRG0 241 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 MYBP10242 640 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 PSMC6P62333 389 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 CEP55Q53EZ4 464 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 ZNF746Q6NUN9 644 aaPredicted RBP9.85□□□□□ -0.83
GGA3-222ENST00000621217 IFT20Q8IY31 132 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 CEP63Q96MT8 703 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 C7orf25Q9BPX7 421 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 LRRC1Q9BTT6 524 aa9.85□□□□□ -0.83
GGA3-222ENST00000621217 USTQ9Y2C2 406 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms