RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 MRPS27Q92552 414 aaKnown RBP17.44■□□□□ 0.38
PCDHGC3-204ENST00000617222 CEP170P1Q96L14 293 aa17.44■□□□□ 0.38
PCDHGC3-204ENST00000617222 NRCAMQ92823 1304 aa17.44■□□□□ 0.38
PCDHGC3-204ENST00000617222 RRN3P2A6NIE6 340 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 ZBTB42B2RXF5 422 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 PFKFB1P16118 471 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 PTPN11Q06124 597 aaPredicted RBP17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 TARBP2Q15633 366 aaKnown RBP17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 GDF6Q6KF10 455 aaPredicted RBP17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 CCDC73Q6ZRK6 1079 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 KCTD17Q8N5Z5 321 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 LRRC15Q8TF66 581 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 LMBR1Q8WVP7 490 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 SEZ6LQ9BYH1 1024 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 GOLPH3LQ9H4A5 285 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 CYP26B1Q9NR63 512 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 BLOC1S4Q9NUP1 217 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 GTF2IRD1Q9UHL9 959 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 DBR1Q9UK59 544 aaKnown RBP17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 KCNH3Q9ULD8 1083 aa17.43■□□□□ 0.38
PCDHGC3-204ENST00000617222 ARHGEF35A5YM69 484 aa17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 POLR2DO15514 142 aaKnown RBP17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 EYA4O95677 639 aa17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 GNAT1P11488 350 aa17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 STAT6P42226 847 aa17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 RARRES1P49788 294 aa17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 DHX58Q96C10 678 aa17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 ZBTB10Q96DT7 871 aa17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 BHMT2Q9H2M3 363 aa17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 HPSEQ9Y251 543 aa17.42■□□□□ 0.38
PCDHGC3-204ENST00000617222 COL1A2P08123 1366 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 SCN10AQ9Y5Y9 1956 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 FAM237AA0A1B0GTK4 181 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 TREHO43280 583 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 SSBP05455 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 PLA2G4BP0C869 781 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 KLRC1P26715 233 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 HOXC8P31273 242 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 NDUFA8P51970 172 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 DHX8Q14562 1220 aaKnown RBP17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 PTGISQ16647 500 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 LRRC26Q2I0M4 334 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 NAALADL2Q58DX5 795 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 MARCH8Q5T0T0 291 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 MTHFD1LQ6UB35 978 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 IQUBQ8NA54 791 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 RAD54LQ92698 747 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 CEP89Q96ST8 783 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 TRPV6Q9H1D0 765 aa17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 TRMT13Q9NUP7 481 aaKnown RBP17.41■□□□□ 0.38
PCDHGC3-204ENST00000617222 GOLGA6L22H0YM25 854 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 PQBP1O60828 265 aaKnown RBP17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 SYKP43405 635 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 RTP1P59025 263 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 UBE2HP62256 183 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 ADAM17P78536 824 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 TBC1D8BQ0IIM8 1120 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 MCM6Q14566 821 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 SNX17Q15036 470 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 E2F4Q16254 413 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 TRIM60Q495X7 471 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 C1orf53Q5VUE5 145 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 PADI6Q6TGC4 694 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 SYT2Q8N9I0 419 aaPredicted RBP17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 BMP2KQ9NSY1 1161 aaPredicted RBP17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 LMBRD1Q9NUN5 540 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 STK17AQ9UEE5 414 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 TUBE1Q9UJT0 475 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 ATP11BQ9Y2G3 1177 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 PPME1Q9Y570 386 aa17.4■□□□□ 0.38
PCDHGC3-204ENST00000617222 MBLAC1A4D2B0 266 aaPredicted RBP17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 MAGEB2O15479 319 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 B4GALT4O60513 344 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 MAFO75444 373 aaPredicted RBP17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 C22orf31O95567 290 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 SLC12A3P55017 1021 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 TLE2Q04725 743 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 ANKRD33Q7Z3H0 272 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 FAM126BQ8IXS8 530 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 METTL13Q8N6R0 699 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 LARP4BQ92615 738 aaKnown RBP17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 PYM1Q9BRP8 204 aaKnown RBP17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 SUGCTQ9HAC7 445 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 SERTAD1Q9UHV2 236 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 NOD1Q9Y239 953 aa17.39■□□□□ 0.37
PCDHGC3-204ENST00000617222 DCDC2CA8MYV0 355 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 TLR3O15455 904 aaKnown RBP17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 USO1O60763 962 aaKnown RBP17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 DGAT1O75907 488 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 CYP2C9P11712 490 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 LIG1P18858 919 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 RFC5P40937 340 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 POLGP54098 1239 aaPredicted RBP17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 LONRF3Q496Y0 759 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 RINT1Q6NUQ1 792 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 EFCAB12Q6NXP0 572 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 RUFY4Q6ZNE9 571 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 SV2BQ7L1I2 683 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 TOX2Q96NM4 488 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms