RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SENP7Q9BQF6 1050 aa16.79■□□□□ 0.28
UBXN1-218ENST00000616865 NSUN3Q9H649 340 aaKnown RBP16.79■□□□□ 0.28
UBXN1-218ENST00000616865 NOL7Q9UMY1 257 aaKnown RBP16.79■□□□□ 0.28
UBXN1-218ENST00000616865 NRCAMQ92823 1304 aa16.78■□□□□ 0.28
UBXN1-218ENST00000616865 PRR33A8MZF0 331 aa16.78■□□□□ 0.28
UBXN1-218ENST00000616865 ADAMTS3O15072 1205 aa16.78■□□□□ 0.28
UBXN1-218ENST00000616865 XRRA1Q6P2D8 792 aa16.78■□□□□ 0.28
UBXN1-218ENST00000616865 BRAPQ7Z569 592 aa16.78■□□□□ 0.28
UBXN1-218ENST00000616865 ZSCAN16Q9H4T2 348 aaPredicted RBP16.78■□□□□ 0.28
UBXN1-218ENST00000616865 ADGRA3Q8IWK6 1321 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 M0R2N6 131 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 CHRNA1P02708 482 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 LINC00271P0C7V0 271 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 U2AF2P26368 475 aaKnown RBP eCLIP16.77■□□□□ 0.285e-8■■■□□ 16.8
UBXN1-218ENST00000616865 CTNNB1P35222 781 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 TCF7P36402 384 aaPredicted RBP16.77■□□□□ 0.28
UBXN1-218ENST00000616865 INF2Q27J81 1249 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 TAF2Q6P1X5 1199 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 RPAINQ86UA6 219 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 NLRX1Q86UT6 975 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 FIBCD1Q8N539 461 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 GIMAP8Q8ND71 665 aaPredicted RBP16.77■□□□□ 0.28
UBXN1-218ENST00000616865 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
UBXN1-218ENST00000616865 RC3H2Q9HBD1 1191 aaKnown RBP16.77■□□□□ 0.28
UBXN1-218ENST00000616865 CIZ1Q9ULV3 898 aaPredicted RBP16.77■□□□□ 0.28
UBXN1-218ENST00000616865 KIAA1671Q9BY89 1806 aa16.77■□□□□ 0.27
UBXN1-218ENST00000616865 C5orf67F2Z3F1 127 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 GHRP10912 638 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 ALADP13716 330 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 ATP2B1P20020 1258 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 SREBF1P36956 1147 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 MGAT3Q09327 533 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 RUFY4Q6ZNE9 571 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 GPRASP2Q96D09 838 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 NAP1L4Q99733 375 aaKnown RBP16.76■□□□□ 0.27
UBXN1-218ENST00000616865 CLDND1Q9NY35 253 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 CHMP5Q9NZZ3 219 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 FAM50BQ9Y247 325 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 RWDD3Q9Y3V2 267 aa16.76■□□□□ 0.27
UBXN1-218ENST00000616865 F13A1P00488 732 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 KCNA2P16389 499 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 ZP2Q05996 745 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 PPFIA1Q13136 1202 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 LPIN1Q14693 890 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 LETM2Q2VYF4 491 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 EP400NLQ6ZTU2 488 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 NEK8Q86SG6 692 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 TNFRSF25Q93038 417 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 C11orf84Q9BUA3 381 aaPredicted RBP16.75■□□□□ 0.27
UBXN1-218ENST00000616865 LMAN2LQ9H0V9 348 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 TUBE1Q9UJT0 475 aa16.75■□□□□ 0.27
UBXN1-218ENST00000616865 FAM205CA6NFA0 338 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 ATP9AO75110 1047 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 RB1P06400 928 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 USP11P51784 963 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 RESTQ13127 1097 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 PKP1Q13835 747 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 GRIK4Q16099 956 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 RSPH3Q86UC2 560 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 CDHR1Q96JP9 859 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 ERAP1Q9NZ08 941 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 ATP6V1DQ9Y5K8 247 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 TTC3P53804 2025 aa16.74■□□□□ 0.27
UBXN1-218ENST00000616865 GSTTP1A0A1W2PQM5 241 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 MBLAC1A4D2B0 266 aaPredicted RBP16.73■□□□□ 0.27
UBXN1-218ENST00000616865 DCXO43602 365 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 CCNT1O60563 726 aaKnown RBP16.73■□□□□ 0.27
UBXN1-218ENST00000616865 BRD1O95696 1058 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 MARK3P27448 753 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 BMPR1AP36894 532 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 LTBRP36941 435 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 RILPL1Q5EBL4 403 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 EARS2Q5JPH6 523 aaKnown RBP16.73■□□□□ 0.27
UBXN1-218ENST00000616865 FBXO47Q5MNV8 452 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 SEPT1Q8WYJ6 367 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 CLP1Q92989 425 aaKnown RBP16.73■□□□□ 0.27
UBXN1-218ENST00000616865 C5orf42Q9H799 3197 aa16.73■□□□□ 0.27
UBXN1-218ENST00000616865 C19orf67A6NJJ6 358 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 GRM6O15303 877 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 NCK2O43639 380 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 MARCH6O60337 910 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 CYP3A4P08684 503 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 GCFC2P16383 781 aaKnown RBP16.72■□□□□ 0.27
UBXN1-218ENST00000616865 ITGB5P18084 799 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 DDIT3P35638 169 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 TRAPPC10P48553 1259 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 MTMR1Q13613 665 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 CSPP1Q1MSJ5 1256 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 CTC1Q2NKJ3 1217 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 FOXD4L6Q3SYB3 417 aaPredicted RBP16.72■□□□□ 0.27
UBXN1-218ENST00000616865 TTC38Q5R3I4 469 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 FOXD4L3Q6VB84 417 aaPredicted RBP16.72■□□□□ 0.27
UBXN1-218ENST00000616865 TSHZ1Q6ZSZ6 1077 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 ADHFE1Q8IWW8 467 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 DNAJB3Q8WWF6 145 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 ZNF689Q96CS4 500 aaPredicted RBP16.72■□□□□ 0.27
UBXN1-218ENST00000616865 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
UBXN1-218ENST00000616865 CDY2AQ9Y6F7 541 aa16.72■□□□□ 0.27
UBXN1-218ENST00000616865 LOXHD1Q8IVV2 1947 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms