RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 LRIG3Q6UXM1 1119 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 PDE6BP35913 854 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 PRPSAP1Q14558 356 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 AMACRQ9UHK6 382 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 ZBBXA8MT70 800 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 HSPA9P38646 679 aaKnown RBP20.21■□□□□ 0.83
SPAST-203ENST00000615843 SPOPLQ6IQ16 392 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 RAD9BQ6WBX8 426 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 GGT7Q9UJ14 662 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 YEATS2Q9ULM3 1422 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 hCG_2014768A0A024R1R8 64 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 TOM1O60784 492 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 TTLL1O95922 423 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 KRT10P13645 584 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 FMR1Q06787 632 aaKnown RBP eCLIP20.21■□□□□ 0.83
SPAST-203ENST00000615843 KIF22Q14807 665 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 TRMT10CQ7L0Y3 403 aaKnown RBP20.21■□□□□ 0.83
SPAST-203ENST00000615843 MCF2L2Q86YR7 1114 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 ANAPC7Q9UJX3 599 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 ARHGAP10A1A4S6 786 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 TJP3O95049 919 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 C16orf87Q6PH81 154 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 KCTD1Q719H9 257 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 RAB44Q7Z6P3 723 aaPredicted RBP20.21■□□□□ 0.83
SPAST-203ENST00000615843 DNAAF3Q8N9W5 541 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 DDX17Q92841 729 aaKnown RBP20.21■□□□□ 0.83
SPAST-203ENST00000615843 MXD3Q9BW11 206 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 KMT5AQ9NQR1 393 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 SYNJ2BP-COX16A0A087WUM0 186 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 PHF20L1A8MW92 1017 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 EPHB1P54762 984 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 ITKQ08881 620 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 UBE2SQ16763 222 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 SEC16BQ96JE7 1060 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 CALR3Q96L12 384 aaKnown RBP20.21■□□□□ 0.83
SPAST-203ENST00000615843 PRMT1Q99873 361 aaKnown RBP20.21■□□□□ 0.83
SPAST-203ENST00000615843 MED10Q9BTT4 135 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 POLD4Q9HCU8 107 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 COX16Q9P0S2 106 aa20.21■□□□□ 0.83
SPAST-203ENST00000615843 CFAP69A5D8W1 941 aa20.2■□□□□ 0.83
SPAST-203ENST00000615843 SLC16A2P36021 539 aa20.2■□□□□ 0.83
SPAST-203ENST00000615843 HEMGNQ9BXL5 484 aa20.2■□□□□ 0.83
SPAST-203ENST00000615843 FHOD1Q9Y613 1164 aa20.2■□□□□ 0.83
SPAST-203ENST00000615843 PLEKHG1Q9ULL1 1385 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 TCP11X1B4DZS4 312 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 MCF2P10911 925 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 UBXN2AP68543 259 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 ANO5Q75V66 913 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 METTL13Q8N6R0 699 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 LY9Q9HBG7 655 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 CNOT8Q9UFF9 292 aaKnown RBP20.2■□□□□ 0.82
SPAST-203ENST00000615843 HSPA4LO95757 839 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 PDXDC1Q6P996 788 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 IPO11Q9UI26 975 aaKnown RBP20.2■□□□□ 0.82
SPAST-203ENST00000615843 ZNF804BA4D1E1 1349 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 ZRANB2O95218 330 aaKnown RBP eCLIP20.2■□□□□ 0.82
SPAST-203ENST00000615843 H2AFXP16104 143 aaPredicted RBP20.2■□□□□ 0.82
SPAST-203ENST00000615843 KPNA2P52292 529 aaKnown RBP20.2■□□□□ 0.82
SPAST-203ENST00000615843 KLHL38Q2WGJ6 581 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 SUGCTQ9HAC7 445 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 SLC40A1Q9NP59 571 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 ITIH6Q6UXX5 1313 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 MCAMP43121 646 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 FXR1P51114 621 aaKnown RBP eCLIP20.2■□□□□ 0.82
SPAST-203ENST00000615843 NR1I3Q14994 352 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 PLCB4Q15147 1175 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 NOA1Q8NC60 698 aaKnown RBP20.2■□□□□ 0.82
SPAST-203ENST00000615843 CCNYQ8ND76 341 aa20.2■□□□□ 0.82
SPAST-203ENST00000615843 SORBS3O60504 671 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 DHX34Q14147 1143 aaKnown RBP20.19■□□□□ 0.82
SPAST-203ENST00000615843 PFKFB3Q16875 520 aaPredicted RBP20.19■□□□□ 0.82
SPAST-203ENST00000615843 FSCBQ5H9T9 825 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 LCA5Q86VQ0 697 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 AGTP01019 485 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 CHN1P15882 459 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 RASGRF1Q13972 1273 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 CYFIP2Q96F07 1278 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 BHMT2Q9H2M3 363 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 BCORL1Q5H9F3 1711 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 CCDC137Q6PK04 289 aaKnown RBP20.19■□□□□ 0.82
SPAST-203ENST00000615843 KLC1Q07866 573 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 EPHA10Q5JZY3 1008 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 CCDC17Q96LX7 622 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 EIF2AQ9BY44 585 aaKnown RBP20.19■□□□□ 0.82
SPAST-203ENST00000615843 FAM96AQ9H5X1 160 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 KRT82Q9NSB4 513 aa20.19■□□□□ 0.82
SPAST-203ENST00000615843 HNRNPCP07910 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
SPAST-203ENST00000615843 MS4A14Q96JA4 679 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 FUT8Q9BYC5 575 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.18■□□□□ 0.82
SPAST-203ENST00000615843 DTNBP1Q96EV8 351 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 TRIM10Q9UDY6 481 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 ADD3Q9UEY8 706 aaKnown RBP20.18■□□□□ 0.82
SPAST-203ENST00000615843 TUBE1Q9UJT0 475 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 KRT38O76015 456 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 ZBED1O96006 694 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 KRT14P02533 472 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 USP17L8P0C7I0 530 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 HSPA8P11142 646 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms