RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 WHAMMP3Q1A5X7 153 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 SKIDA1Q1XH10 827 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 TKFCQ3LXA3 575 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 RNF207Q6ZRF8 634 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 NEK8Q86SG6 692 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 NCAPG2Q86XI2 1143 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 STAMQ92783 540 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 PARK7Q99497 189 aaKnown RBP14.35□□□□□ -0.11
FOXN3-219ENST00000615335 ZSWIM4Q9H7M6 989 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 ACAD9Q9H845 621 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 LZTFL1Q9NQ48 299 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 CTAGE15A4D2H0 777 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 IGF2BP3O00425 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
FOXN3-219ENST00000615335 CCNT1O60563 726 aaKnown RBP14.34□□□□□ -0.11
FOXN3-219ENST00000615335 CNMDO75829 334 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 CTAGE8P0CG41 777 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 MCM7P33993 719 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 PRPHP41219 470 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 DRP2Q13474 957 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 DEFB115Q30KQ5 88 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 Q3C1V9 767 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 RRAGBQ5VZM2 374 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 CTAGE6Q86UF2 777 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 RIOX2Q8IUF8 465 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 CNGA4Q8IV77 575 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 CTAGE4Q8IX94 777 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 GTF3C2Q8WUA4 911 aaPredicted RBP14.34□□□□□ -0.11
FOXN3-219ENST00000615335 CCDC51Q96ER9 411 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 PUF60Q9UHX1 559 aaKnown RBP14.34□□□□□ -0.11
FOXN3-219ENST00000615335 HPCAL4Q9UM19 191 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 MYO6Q9UM54 1294 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 ITIH6Q6UXX5 1313 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 KIF5CO60282 957 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 CASP14P31944 242 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 SLC8A1P32418 973 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 HSD17B4P51659 736 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 RPS6P62753 249 aaKnown RBP14.34□□□□□ -0.11
FOXN3-219ENST00000615335 SREBF2Q12772 1141 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 SNCBQ16143 134 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 ANKRD13CQ8N6S4 541 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 MAB21L3Q8N8X9 362 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 MOV10L1Q9BXT6 1211 aaKnown RBP14.34□□□□□ -0.11
FOXN3-219ENST00000615335 IRX2Q9BZI1 471 aaPredicted RBP14.34□□□□□ -0.11
FOXN3-219ENST00000615335 BLZF1Q9H2G9 400 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 MYH7BA7E2Y1 1941 aa14.34□□□□□ -0.11
FOXN3-219ENST00000615335 GOLGA6CA6NDK9 693 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 GTPBP6O43824 516 aaPredicted RBP14.33□□□□□ -0.12
FOXN3-219ENST00000615335 RASSF9O75901 435 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 GOLGA6DP0CG33 693 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 ERVK-9P63128 1117 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 ERVK-24P63145 666 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 STIM1Q13586 685 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 CHST13Q8NET6 341 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 TCP11Q8WWU5 503 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 ZIC5Q96T25 663 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 GOLGA6AQ9NYA3 693 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 MAP3K20Q9NYL2 800 aaKnown RBP14.33□□□□□ -0.12
FOXN3-219ENST00000615335 CCT6AP40227 531 aaKnown RBP14.33□□□□□ -0.12
FOXN3-219ENST00000615335 GCLCP48506 637 aaPredicted RBP14.33□□□□□ -0.12
FOXN3-219ENST00000615335 BAATQ14032 418 aaPredicted RBP14.33□□□□□ -0.12
FOXN3-219ENST00000615335 CCDC40Q4G0X9 1142 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 TLDC1Q6P9B6 456 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 IFNL1Q8IU54 200 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 ANKRD35Q8N283 1001 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 GPRC5AQ8NFJ5 357 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 MICAL1Q8TDZ2 1067 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 IRAK4Q9NWZ3 460 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 FBXO40Q9UH90 709 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 LIMA1Q9UHB6 759 aaKnown RBP14.33□□□□□ -0.12
FOXN3-219ENST00000615335 RWDD2AQ9UIY3 292 aa14.33□□□□□ -0.12
FOXN3-219ENST00000615335 N4BP3O15049 544 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 COBLO75128 1261 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 SLC25A27O95847 323 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 GYPCP04921 128 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 RHOXF2BP0C7M4 288 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 PECAM1P16284 738 aaPredicted RBP14.32□□□□□ -0.12
FOXN3-219ENST00000615335 SPAG1Q07617 926 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 KRT31Q15323 416 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 TAF1CQ15572 869 aaPredicted RBP14.32□□□□□ -0.12
FOXN3-219ENST00000615335 WDR78Q5VTH9 848 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 SAMD3Q8N6K7 520 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 SYTL5Q8TDW5 730 aaPredicted RBP14.32□□□□□ -0.12
FOXN3-219ENST00000615335 RHOXF2Q9BQY4 288 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 COL20A1Q9P218 1284 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 GGA2Q9UJY4 613 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 RBBP6Q7Z6E9 1792 aaKnown RBP14.32□□□□□ -0.12
FOXN3-219ENST00000615335 RASSF10A6NK89 507 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 FXR1P51114 621 aaKnown RBP eCLIP14.32□□□□□ -0.12
FOXN3-219ENST00000615335 RPS6KA3P51812 740 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 UBXN2AP68543 259 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 ARHGAP4P98171 946 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 GHRHRQ02643 423 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 PAK1Q13153 545 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 NOGQ13253 232 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 COG1Q8WTW3 980 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 SAAL1Q96ER3 474 aa14.32□□□□□ -0.12
FOXN3-219ENST00000615335 RSRC1Q96IZ7 334 aaKnown RBP14.32□□□□□ -0.12
FOXN3-219ENST00000615335 CRACR2AQ9BSW2 395 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms