RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 IGSF3O75054 1194 aa7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 CSF2RBP32927 897 aa7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 ETV4P43268 484 aa7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 LRSAM1Q6UWE0 723 aa7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 RALYLQ86SE5 291 aaKnown RBP7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 FERMT3Q86UX7 667 aa7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 KBTBD2Q8IY47 623 aa7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 WDR48Q8TAF3 677 aa7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 SLKQ9H2G2 1235 aaPredicted RBP7.27□□□□□ -1.25
SCAMP1-205ENST00000614488 A0A087X0B3 334 aa7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 ATP2A2P16615 1042 aaKnown RBP7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 SYN1P17600 705 aa7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 GYS2P54840 703 aa7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 EPHA7Q15375 998 aa7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 NME9Q86XW9 330 aa7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 EFHBQ8N7U6 833 aa7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 C16orf92Q96LL3 132 aa7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 IFT57Q9NWB7 429 aa7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 CNOT11Q9UKZ1 510 aaKnown RBP7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 MAPRE3Q9UPY8 281 aa7.26□□□□□ -1.25
SCAMP1-205ENST00000614488 ZNF891A8MT65 544 aaPredicted RBP7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 FOXD2O60548 495 aaPredicted RBP7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 PLATP00750 562 aa7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 APEX1P27695 318 aaKnown RBP7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 USP10Q14694 798 aaKnown RBP7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 PCBP1Q15365 356 aaKnown RBP eCLIP7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 TMEM200BQ69YZ2 307 aa7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 IFNL2Q8IZJ0 200 aa7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 CARD11Q9BXL7 1154 aa7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 ZDHHC5Q9C0B5 715 aa7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 OXSMQ9NWU1 459 aa7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 ZDHHC9Q9Y397 364 aa7.25□□□□□ -1.25
SCAMP1-205ENST00000614488 UBA6A0AVT1 1052 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 LAMTOR5O43504 91 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 PDE8AO60658 829 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 PRLP01236 227 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 MYCLP1P12525 358 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 SLC9A1P19634 815 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 ROM1Q03395 351 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 ADCY1Q08828 1119 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 SEPT7Q16181 437 aaKnown RBP7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 ZZZ3Q8IYH5 903 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 NXPE1Q8N323 547 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 OR2W6PQ8NHA6 318 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 ERCC4Q92889 916 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 MAML3Q96JK9 1138 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 ELF4Q99607 663 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 SLC4A7Q9Y6M7 1214 aa7.24□□□□□ -1.25
SCAMP1-205ENST00000614488 A0A0G2JNJ9 132 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 SCNN1BP51168 640 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 EPHB4P54760 987 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 CD83Q01151 205 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 OCRLQ01968 901 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 MAP3K12Q12852 859 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 EIF4HQ15056 248 aaKnown RBP7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 SKOR2Q2VWA4 1001 aaPredicted RBP7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 TBC1D10BQ4KMP7 808 aaPredicted RBP7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 TTC38Q5R3I4 469 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 GRAMD4Q6IC98 578 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 ESRP1Q6NXG1 681 aaKnown RBP7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 PASD1Q8IV76 773 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 SMC1BQ8NDV3 1235 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 SCYL1Q96KG9 808 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 BDH2Q9BUT1 245 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 Q9UFV3 132 aa7.23□□□□□ -1.25
SCAMP1-205ENST00000614488 KRTAP9-7A8MTY7 169 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 CLSTN1O94985 981 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 HMGCRP04035 888 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 PTX3P26022 381 aaPredicted RBP7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 ADCY8P40145 1251 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 PPP2CBP62714 309 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 PPP2CAP67775 309 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 SLC6A3Q01959 620 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 MOGSQ13724 837 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 SART3Q15020 963 aaKnown RBP7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 ZNF827Q17R98 1081 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 ARHGEF18Q6ZSZ5 1173 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 OTOP2Q7RTS6 562 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 GPR155Q7Z3F1 870 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 THNSL2Q86YJ6 484 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 CHTF18Q8WVB6 975 aa7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 THG1LQ9NWX6 298 aaKnown RBP7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 H2AFY2Q9P0M6 372 aaPredicted RBP7.22□□□□□ -1.25
SCAMP1-205ENST00000614488 ITGB3P05106 788 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 CELA3BP08861 270 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 ZNF888P0CJ79 500 aaPredicted RBP7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 LSSP48449 732 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 KPNA1P52294 538 aaPredicted RBP7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 LRRC32Q14392 662 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 ZNF568Q3ZCX4 644 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 ZMAT1Q5H9K5 638 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 GPR158Q5T848 1215 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 SLFN12LQ6IEE8 588 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 RBM15Q96T37 977 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 ZMAT4Q9H898 229 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 SEC61A2Q9H9S3 476 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 TOMM22Q9NS69 142 aa7.21□□□□□ -1.26
SCAMP1-205ENST00000614488 B4GALT4O60513 344 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms