RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 E9PMD0 336 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PDE2AO00408 941 aaPredicted RBP11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 ZNF131P52739 623 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MYBPC2Q14324 1141 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 HLTFQ14527 1009 aaKnown RBP eCLIP11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 LRRC1Q9BTT6 524 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 EHMT1Q9H9B1 1298 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 VIPAS39Q9H9C1 493 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MLXIPQ9HAP2 919 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 ZNF70Q9UC06 446 aaPredicted RBP11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PCDHA13Q9Y5I0 950 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 NKRFO15226 690 aaKnown RBP eCLIP11.89□□□□□ -0.515e-6■□□□□ 8.5
SENP3-EIF4A1-201ENST00000614237 USO1O60763 962 aaKnown RBP11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 GH2P01242 217 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 SERPING1P05155 500 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 OTOP1Q7RTM1 612 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 NEK9Q8TD19 979 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 TBC1D31Q96DN5 1066 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CCDC42Q96M95 316 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 TDRD3Q9H7E2 651 aaKnown RBP11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 RNF14Q9UBS8 474 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 TSKSQ9UJT2 592 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 FEM1BQ9UK73 627 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 HDAC9Q9UKV0 1011 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 LOC285556D6RIA3 1793 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 SMIM23A6NLE4 172 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 POTECB2RU33 542 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CES2O00748 559 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 TCP10Q12799 353 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 KIF5AQ12840 1032 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 METTL14Q9HCE5 456 aaKnown RBP11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PSD3Q9NYI0 1048 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 NENFQ9UMX5 172 aa11.89□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 RCCD1A6NED2 376 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MAPTP10636 758 aaKnown RBP11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 RXRBP28702 533 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CDC25CP30307 473 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 HSD17B4P51659 736 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 SPA17Q15506 151 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 BORCS6Q96GS4 357 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CSRNP1Q96S65 589 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 STRA6Q9BX79 667 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 GANQ9H2C0 597 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 VCPKMTQ9H867 229 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.88□□□□□ -0.516e-7■■■■□ 26.5
SENP3-EIF4A1-201ENST00000614237 TMOD2Q9NZR1 351 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 SUFUQ9UMX1 484 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MRPL11Q9Y3B7 192 aaKnown RBP11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 BZW2Q9Y6E2 419 aaKnown RBP11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PLEKP08567 350 aaPredicted RBP11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 HOXD13P35453 343 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PTGER2P43116 358 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 KIF11P52732 1056 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 USP14P54578 494 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MMGT1Q8N4V1 131 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 COG1Q8WTW3 980 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MS4A14Q96JA4 679 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MED4Q9NPJ6 270 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 FAM207AQ9NSI2 230 aaPredicted RBP11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 ZBTB21Q9ULJ3 1066 aa11.88□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 E7EVH7 732 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 EPHB6O15197 1021 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CALUO43852 315 aaPredicted RBP11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 SHROOM1Q2M3G4 852 aaPredicted RBP11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 ZNF536O15090 1300 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CETN3O15182 167 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PPP1R12BO60237 982 aaPredicted RBP11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MARCH6O60337 910 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 NEBLO76041 1014 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 GFPT2O94808 682 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MOCS3O95396 460 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 KCNA3P22001 575 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PRKCIP41743 596 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CACNB3P54284 484 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 IQCEQ6IPM2 695 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 GLIS3Q8NEA6 775 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 SLC16A10Q8TF71 515 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PLCD4Q9BRC7 762 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 ODF2LQ9ULJ1 636 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PACSIN2Q9UNF0 486 aaPredicted RBP11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 MEIS1O00470 390 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 TNFRSF8P28908 595 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PEX19P40855 299 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CDR1P51861 262 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.517e-8■■■■■ 28.3
SENP3-EIF4A1-201ENST00000614237 C1orf186Q6ZWK4 172 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 DNAAF5Q86Y56 855 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 KLHL7Q8IXQ5 586 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CCDC114Q96M63 670 aa11.87□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 RIT2Q99578 217 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms