RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 CLIC4Q9Y696 253 aa14.38□□□□□ -0.11
CCL4-201ENST00000613947 ZBTB42B2RXF5 422 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 KIF20AO95235 890 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 BRD1O95696 1058 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 OATP04181 439 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 PRPHP41219 470 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 CEBPZQ03701 1054 aaKnown RBP14.37□□□□□ -0.11
CCL4-201ENST00000613947 CTTNQ14247 550 aaKnown RBP14.37□□□□□ -0.11
CCL4-201ENST00000613947 FOXD4L6Q3SYB3 417 aaPredicted RBP14.37□□□□□ -0.11
CCL4-201ENST00000613947 FOXD4L3Q6VB84 417 aaPredicted RBP14.37□□□□□ -0.11
CCL4-201ENST00000613947 DTHD1Q6ZMT9 781 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 TPH2Q8IWU9 490 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 WNT8BQ93098 351 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 LXNQ9BS40 222 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 NOC4LQ9BVI4 516 aaKnown RBP14.37□□□□□ -0.11
CCL4-201ENST00000613947 PPP1R12CQ9BZL4 782 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 HIPK3Q9H422 1215 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 UMODL1Q5DID0 1318 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 TMEM150BA6NC51 233 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 RRN3P2A6NIE6 340 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 STBD1O95210 358 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 TIMP1P01033 207 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 RAG1P15918 1043 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 PDIA5Q14554 519 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 ARL6IP4Q66PJ3 421 aaKnown RBP14.37□□□□□ -0.11
CCL4-201ENST00000613947 SERINC5Q86VE9 423 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 IGSF22Q8N9C0 903 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 DHX38Q92620 1227 aaKnown RBP14.37□□□□□ -0.11
CCL4-201ENST00000613947 FAM167AQ96KS9 214 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 USP28Q96RU2 1077 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 NRBP2Q9NSY0 501 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 TUBE1Q9UJT0 475 aa14.37□□□□□ -0.11
CCL4-201ENST00000613947 TRIOBPQ9H2D6 2365 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 SYCE3A1L190 88 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 MBLAC1A4D2B0 266 aaPredicted RBP14.36□□□□□ -0.11
CCL4-201ENST00000613947 LETM1O95202 739 aaPredicted RBP14.36□□□□□ -0.11
CCL4-201ENST00000613947 BMP15O95972 392 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 SPATA31C1P0DKV0 1188 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 CYP2C18P33260 490 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 PTK7Q13308 1070 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 PTPAQ15257 358 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 XKR3Q5GH77 459 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 ZNF484Q5JVG2 852 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 ANO5Q75V66 913 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 CATSPER3Q86XQ3 398 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 SH2D3AQ9BRG2 576 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 ZSWIM4Q9H7M6 989 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 SPTLC3Q9NUV7 552 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 TFIP11Q9UBB9 837 aaKnown RBP14.36□□□□□ -0.11
CCL4-201ENST00000613947 LRWD1Q9UFC0 647 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 CEP131Q9UPN4 1083 aa14.36□□□□□ -0.11
CCL4-201ENST00000613947 VWA3AA6NCI4 1184 aa14.35□□□□□ -0.11
CCL4-201ENST00000613947 ZBTB39O15060 712 aa14.35□□□□□ -0.11
CCL4-201ENST00000613947 ZSCAN20P17040 1043 aaPredicted RBP14.35□□□□□ -0.11
CCL4-201ENST00000613947 CDC25AP30304 524 aa14.35□□□□□ -0.11
CCL4-201ENST00000613947 MDM2Q00987 491 aaPredicted RBP14.35□□□□□ -0.11
CCL4-201ENST00000613947 RUFY4Q6ZNE9 571 aa14.35□□□□□ -0.11
CCL4-201ENST00000613947 C4orf19Q8IY42 314 aa14.35□□□□□ -0.11
CCL4-201ENST00000613947 BADQ92934 168 aa14.35□□□□□ -0.11
CCL4-201ENST00000613947 RAB34Q9BZG1 259 aa14.35□□□□□ -0.11
CCL4-201ENST00000613947 SEPT9Q9UHD8 586 aaPredicted RBP14.35□□□□□ -0.11
CCL4-201ENST00000613947 PP2D1A8MPX8 630 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 DKC1O60832 514 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCL4-201ENST00000613947 MED24O75448 989 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 KLRC1P26715 233 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 MARCKSP29966 332 aaPredicted RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 CCL23P55773 120 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 GRIN1Q05586 938 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 MTHFD1LQ6UB35 978 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 ERMNQ8TAM6 284 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 NIFKQ9BYG3 293 aaKnown RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCL4-201ENST00000613947 EVPLQ92817 2033 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 COL1A2P08123 1366 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 A0A087WWV3 80 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 PTMAP06454 111 aaKnown RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 TPM3P06753 285 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 RPA1P27694 616 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 YWHABP31946 246 aaKnown RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 THPOP40225 353 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 MAGEA10P43363 369 aaPredicted RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 BFSP2Q13515 415 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 SLC39A14Q15043 492 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 TARBP2Q15633 366 aaKnown RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 ECM1Q16610 540 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 PLA2G4FQ68DD2 849 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 MFSD5Q6N075 450 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 CAGE1Q8TC20 777 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 NEK9Q8TD19 979 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 ZNF396Q96N95 335 aaPredicted RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 LBHD1Q9BQE6 289 aaPredicted RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 POLR3CQ9BUI4 534 aaPredicted RBP14.34□□□□□ -0.11
CCL4-201ENST00000613947 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 PCDHA2Q9Y5H9 948 aa14.34□□□□□ -0.11
CCL4-201ENST00000613947 RBAK-RBAKDNI3L0D1 243 aa14.33□□□□□ -0.12
CCL4-201ENST00000613947 LYPLA2O95372 231 aa14.33□□□□□ -0.12
CCL4-201ENST00000613947 C22orf31O95567 290 aa14.33□□□□□ -0.12
CCL4-201ENST00000613947 CKBP12277 381 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms