RNA–Protein interactions for RNA: ENST00000613776.1

ACACA-229, Transcript of acetyl-CoA carboxylase alpha, human

TSL 2

Gene ACACA, Length 1,372 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-229	ENST00000613776	LIMK1	P53667	647 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	TFAP4	Q01664	338 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	SNW1	Q13573	536 aa	Known RBP	11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	RSPH3	Q86UC2	560 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	CELF5	Q8N6W0	485 aa	Known RBP	11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	TMEM87A	Q8NBN3	555 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	DNAJB3	Q8WWF6	145 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	RMDN3	Q96TC7	470 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	MLXIP	Q9HAP2	919 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	ZNF287	Q9HBT7	754 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	STX8	Q9UNK0	236 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	WASF3	Q9UPY6	502 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	RALGAPA1	Q6GYQ0	2036 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	ADAMTS20	P59510	1910 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	NRCAM	Q92823	1304 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	BPTF	Q12830	3046 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	PLIN4	Q96Q06	1357 aa		11.93	□□□□□ -0.5
ACACA-229	ENST00000613776	FOXD2	O60548	495 aa	Predicted RBP	11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	CXCL14	O95715	111 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	PDE4A	P27815	886 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	SARS	P49591	514 aa	Known RBP	11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	SP2	Q02086	613 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	USH1G	Q495M9	461 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	ARHGEF16	Q5VV41	709 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	KCNT2	Q6UVM3	1135 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	BTNL9	Q6UXG8	535 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	TRIM50	Q86XT4	487 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	GLG1	Q92896	1179 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	PUS7L	Q9H0K6	701 aa	Known RBP	11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	SFXN1	Q9H9B4	322 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	GPCPD1	Q9NPB8	672 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	SLC2A4RG	Q9NR83	387 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	PADI3	Q9ULW8	664 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	LOC400499	M0QZD8	3231 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	FGFR1	P11362	822 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	UBA1	P22314	1058 aa	Known RBP	11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	SF3A2	Q15428	464 aa	Known RBP	11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	TAF2	Q6P1X5	1199 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	SSH3	Q8TE77	659 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	SLC22A17	Q8WUG5	538 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	AUTS2	Q8WXX7	1259 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	NXPE3	Q969Y0	559 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	ZNF558	Q96NG5	402 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	MYADM	Q96S97	322 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	PRMT8	Q9NR22	394 aa	Predicted RBP	11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	RXFP3	Q9NSD7	469 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	EPS15L1	Q9UBC2	864 aa		11.92	□□□□□ -0.5
ACACA-229	ENST00000613776	CCDC171	Q6TFL3	1326 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	WDFY3	Q8IZQ1	3526 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	GSG1L2	A8MUP6	293 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	NR3C2	P08235	984 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	CD72	P21854	359 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	PPM1A	P35813	382 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	MRPS6	P82932	125 aa	Known RBP	11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	PAK2	Q13177	524 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	STPG1	Q5TH74	334 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	RGS22	Q8NE09	1264 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	DCAF4	Q8WV16	495 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	BBX	Q8WY36	941 aa	Predicted RBP	11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	SCNM1	Q9BWG6	230 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	LSM14B	Q9BX40	385 aa	Known RBP	11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	USP26	Q9BXU7	913 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	TMX1	Q9H3N1	280 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	BCAS3	Q9H6U6	928 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	SPG21	Q9NZD8	308 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	PNMA2	Q9UL42	364 aa		11.91	□□□□□ -0.5
ACACA-229	ENST00000613776	C2orf16	Q68DN1	1984 aa		11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	NOP56	O00567	594 aa	Known RBP	11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	GIPC1	O14908	333 aa		11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	NMT2	O60551	498 aa		11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	MYCL	P12524	364 aa	Predicted RBP	11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	MAGEA9	P43362	315 aa		11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	NOVA1	P51513	510 aa	Known RBP	11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	ZNF252P-AS1	Q0IIN9	211 aa		11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	SIM2	Q14190	667 aa	Predicted RBP	11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	TMEM266	Q2M3C6	531 aa		11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	UTP14C	Q5TAP6	766 aa	Known RBP	11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	LRRC55	Q6ZSA7	311 aa		11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	C12orf50	Q8NA57	414 aa	Predicted RBP	11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.9	□□□□□ -0.5	5e-6	■■■■■ 26.9
ACACA-229	ENST00000613776	HNRNPAB	Q99729	332 aa	Known RBP	11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	DDX23	Q9BUQ8	820 aa	Known RBP	11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.9	□□□□□ -0.5	4e-7	■■■■■ 47.6
ACACA-229	ENST00000613776	NOP58	Q9Y2X3	529 aa	Known RBP	11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	GPSM3	Q9Y4H4	160 aa		11.9	□□□□□ -0.5
ACACA-229	ENST00000613776	WDR19	Q8NEZ3	1342 aa		11.89	□□□□□ -0.51
ACACA-229	ENST00000613776	LOXHD1	Q8IVV2	1947 aa		11.89	□□□□□ -0.51
ACACA-229	ENST00000613776	MGEA5	O60502	916 aa		11.89	□□□□□ -0.51
ACACA-229	ENST00000613776	NRL	P54845	237 aa		11.89	□□□□□ -0.51
ACACA-229	ENST00000613776	GPC5	P78333	572 aa		11.89	□□□□□ -0.51
ACACA-229	ENST00000613776	BMS1	Q14692	1282 aa	Known RBP	11.89	□□□□□ -0.51
ACACA-229	ENST00000613776	UBE3C	Q15386	1083 aa		11.89	□□□□□ -0.51
ACACA-229	ENST00000613776	MLF2	Q15773	248 aa	Predicted RBP	11.89	□□□□□ -0.51
ACACA-229	ENST00000613776	COL28A1	Q2UY09	1125 aa		11.89	□□□□□ -0.51

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