RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 DNAJC8O75937 253 aaPredicted RBP23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 NDUFB10O96000 172 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 LONP1P36776 959 aaKnown RBP23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 BACE1P56817 501 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 ANKRD20A8PQ5CZ79 823 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 PLCB1Q9NQ66 1216 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 B4DLN1 442 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 PES1O00541 588 aaKnown RBP23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 PAEPP09466 180 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 HTRA3P83110 453 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 CYP27A1Q02318 531 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 TTI2Q6NXR4 508 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 KCTD1Q719H9 257 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 STAG2Q8N3U4 1231 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 TRIM6Q9C030 488 aaPredicted RBP23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 CENPHQ9H3R5 247 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 EMILIN3Q9NT22 766 aa23.99■■□□□ 1.43
POLR2J3-220ENST00000613744 BICDL2A1A5D9 508 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 RTN2O75298 545 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 PDHBP11177 359 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 KIF5BP33176 963 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 SEC24CP53992 1094 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 BIRC3Q13489 604 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 ZNF174Q15697 407 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 PKN1Q16512 942 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 NFRKBQ6P4R8 1299 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 KIAA1683Q9H0B3 1180 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 CPVLQ9H3G5 476 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 GOPCQ9HD26 462 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 GPCPD1Q9NPB8 672 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 BATF3Q9NR55 127 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 RBM12Q9NTZ6 932 aaKnown RBP23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 MOCS3O95396 460 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 MATR3P43243 847 aaKnown RBP eCLIP23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 EARS2Q5JPH6 523 aaKnown RBP23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 SAMD1Q6SPF0 538 aaPredicted RBP23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 MAB21L3Q8N8X9 362 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 WNK4Q96J92 1243 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 TPX2Q9ULW0 747 aaKnown RBP23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 NFU1Q9UMS0 254 aa23.98■■□□□ 1.43
POLR2J3-220ENST00000613744 hCG_1642624A0A1W2PR95 340 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 TRIM49BA6NDI0 452 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 TRAPPC3O43617 180 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 RHOBTB3O94955 611 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 HEXIM1O94992 359 aaKnown RBP23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 SLC1A4P43007 532 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 CARSP49589 748 aaKnown RBP23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 CLNS1AP54105 237 aaKnown RBP23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 PPIL2Q13356 520 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 GRM4Q14833 912 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 ZKSCAN8Q15776 578 aaPredicted RBP23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 C11orf91Q3C1V1 193 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 RGMBQ6NW40 437 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 FAM228AQ86W67 206 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 SHISA4Q96DD7 197 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 KDM4CQ9H3R0 1056 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 MAD2L2Q9UI95 211 aa23.97■■□□□ 1.43
POLR2J3-220ENST00000613744 MGRN1O60291 552 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 APLP1P51693 650 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 FAM83BQ5T0W9 1011 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 FKBP15Q5T1M5 1219 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 TMTC3Q6ZXV5 915 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 SRBD1Q8N5C6 995 aaKnown RBP23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 GIMAP8Q8ND71 665 aaPredicted RBP23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 GMCL1P1Q8NEA9 526 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 FAM212AQ96EL1 285 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 MLXIPQ9HAP2 919 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 GLI1P08151 1106 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 KIF11P52732 1056 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 PPP2R5AQ15172 486 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 CDC37Q16543 378 aaPredicted RBP23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 TTBK2Q6IQ55 1244 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 RUFY4Q6ZNE9 571 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 CEP57Q86XR8 500 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 TLR10Q9BXR5 811 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 OSBPL7Q9BZF2 842 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 EPB41L5Q9HCM4 733 aa23.96■■□□□ 1.43
POLR2J3-220ENST00000613744 UNCXA6NJT0 531 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 SPRYD7Q5W111 196 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 GADL1Q6ZQY3 521 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 NOX5Q96PH1 765 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 HINFPQ9BQA5 517 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 UBA5Q9GZZ9 404 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 SLC12A6Q9UHW9 1150 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 FAM153BP0C7A2 387 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 SLC16A2P36021 539 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 STAT6P42226 847 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 PMS1P54277 932 aaKnown RBP23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 FUT2Q10981 343 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 SLMAPQ14BN4 828 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 FAM153CQ494X1 144 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 AGBL2Q5U5Z8 902 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 RASAL3Q86YV0 1011 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 CACNA2D3Q8IZS8 1091 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 SMCR8Q8TEV9 937 aaPredicted RBP23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 FAM153AQ9UHL3 310 aa23.95■■□□□ 1.42
POLR2J3-220ENST00000613744 GCOM1H8Y6P7 765 aaPredicted RBP23.94■■□□□ 1.42
POLR2J3-220ENST00000613744 MYZAPP0CAP1 466 aa23.94■■□□□ 1.42
POLR2J3-220ENST00000613744 VCAM1P19320 739 aa23.94■■□□□ 1.42
POLR2J3-220ENST00000613744 CSGALNACT2Q8N6G5 542 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms