RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 FAM102BQ5T8I3 360 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 TMEM184AQ6ZMB5 413 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 ZNF654Q8IZM8 581 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 KREMEN2Q8NCW0 462 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 TCF25Q9BQ70 676 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 SDF4Q9BRK5 362 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 S1PR5Q9H228 398 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 RWDD1Q9H446 243 aaPredicted RBP19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 ERVK-5Q9HDB9 667 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 TYW1Q9NV66 732 aaKnown RBP19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 PUF60Q9UHX1 559 aaKnown RBP19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 SORCS3Q9UPU3 1222 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 FAM186AA6NE01 2351 aa19.68■□□□□ 0.74
CSNK1E-215ENST00000612795 PROB1E7EW31 1015 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 E7EWF7 191 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 STAT5BP51692 787 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 ACTR2P61160 394 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 NUCB1Q02818 461 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 SYCE2Q6PIF2 218 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 MTHFD1LQ6UB35 978 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 FAM43BQ6ZT52 329 aaPredicted RBP19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 SLC24A5Q71RS6 500 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 ASCL5Q7RTU5 278 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 UBALD2Q8IYN6 164 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 RASGRP4Q8TDF6 673 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 MRPS27Q92552 414 aaKnown RBP19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 MAP3K14Q99558 947 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 LZTS2Q9BRK4 669 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 RGS18Q9NS28 235 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 LZTS1Q9Y250 596 aa19.67■□□□□ 0.74
CSNK1E-215ENST00000612795 HOXB8P17481 243 aaPredicted RBP19.66■□□□□ 0.74
CSNK1E-215ENST00000612795 SMARCA1P28370 1054 aa19.66■□□□□ 0.74
CSNK1E-215ENST00000612795 KCNC3Q14003 757 aa19.66■□□□□ 0.74
CSNK1E-215ENST00000612795 PLPPR4Q7Z2D5 763 aa19.66■□□□□ 0.74
CSNK1E-215ENST00000612795 ATP6V0A4Q9HBG4 840 aa19.66■□□□□ 0.74
CSNK1E-215ENST00000612795 NGRNQ9NPE2 291 aaKnown RBP19.66■□□□□ 0.74
CSNK1E-215ENST00000612795 PCDHA6Q9UN73 950 aa19.66■□□□□ 0.74
CSNK1E-215ENST00000612795 NOC2LQ9Y3T9 749 aaKnown RBP19.66■□□□□ 0.74
CSNK1E-215ENST00000612795 PCDHA8Q9Y5H6 950 aa19.66■□□□□ 0.74
CSNK1E-215ENST00000612795 PRR23AA6NEV1 266 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 C9IYK1 514 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 GPR182O15218 404 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 PLEKHA8P1O95397 391 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 FGFR1P11362 822 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 PDE4AP27815 886 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 GNAQP50148 359 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 TPRNQ4KMQ1 711 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 CES5AQ6NT32 575 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 TMEM40Q8WWA1 233 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 CASP10Q92851 521 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 KCNH7Q9NS40 1196 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 TMEM161AQ9NX61 479 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 ST3GAL5Q9UNP4 418 aa19.65■□□□□ 0.74
CSNK1E-215ENST00000612795 RIF1Q5UIP0 2472 aaKnown RBP19.64■□□□□ 0.74
CSNK1E-215ENST00000612795 HIDE1A8MVS5 230 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 KLRC1P26715 233 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 PPM1AP35813 382 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 SLC26A2P50443 739 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 ANTXR2P58335 489 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 PLCB3Q01970 1234 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 NFXL1Q6ZNB6 911 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 CMTR1Q8N1G2 835 aaKnown RBP19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 TMEM105Q8N8V8 129 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 IGDCC4Q8TDY8 1250 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 NECTIN4Q96NY8 510 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 CWH43Q9H720 699 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 LY9Q9HBG7 655 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 CDH22Q9UJ99 828 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 TAF6LQ9Y6J9 622 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 NFASCO94856 1347 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 WDR81Q562E7 1941 aa19.64■□□□□ 0.73
CSNK1E-215ENST00000612795 DENND4AQ7Z401 1863 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 C2CD4DB7Z1M9 353 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 BACH1O14867 736 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 BRD1O95696 1058 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 NBL1P41271 181 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 PTH1RQ03431 593 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 KRT17Q04695 432 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 CASC1Q6TDU7 716 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 TMC7Q7Z402 723 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 SRBD1Q8N5C6 995 aaKnown RBP19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 RUFY2Q8WXA3 655 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 ZNF558Q96NG5 402 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 PPP1R16BQ96T49 567 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 MXRA8Q9BRK3 442 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 TMEM117Q9H0C3 514 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 MFSD1Q9H3U5 465 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 POMKQ9H5K3 350 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 CDHR5Q9HBB8 845 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 DMDP11532 3685 aa19.63■□□□□ 0.73
CSNK1E-215ENST00000612795 COL1A2P08123 1366 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 hCG_1642624A0A1W2PR95 340 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 HOXA2O43364 376 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 HBP1O60381 514 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 CA8P35219 290 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 AAMPQ13685 434 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 FAM160B1Q5W0V3 765 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 KCNT2Q6UVM3 1135 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 HEATR3Q7Z4Q2 680 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 MB21D2Q8IYB1 491 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms