RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 SH2D3AQ9BRG2 576 aa13.62□□□□□ -0.23
CBWD1-220ENST00000612045 IGKV6D-21A0A0A0MT36 114 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 GSTTP1A0A1W2PQM5 241 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 USO1O60763 962 aaKnown RBP13.61□□□□□ -0.23
CBWD1-220ENST00000612045 MYBP10242 640 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 PTGS1P23219 599 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 EEF1GP26641 437 aaKnown RBP13.61□□□□□ -0.23
CBWD1-220ENST00000612045 NPEPPSP55786 919 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 PRKCEQ02156 737 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 MAPK7Q13164 816 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 ZCWPW2Q504Y3 356 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 CELF3Q5SZQ8 465 aaKnown RBP13.61□□□□□ -0.23
CBWD1-220ENST00000612045 TMC6Q7Z403 805 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 FILIP1Q7Z7B0 1213 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 VSTM4Q8IW00 320 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 NELFCDQ8IXH7 590 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 EEF2KMTQ96G04 330 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 TIPINQ9BVW5 301 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 KCTD10Q9H3F6 313 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 MLXIPQ9HAP2 919 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 ZNF302Q9NR11 478 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 IMPACTQ9P2X3 320 aa13.61□□□□□ -0.23
CBWD1-220ENST00000612045 DIS3Q9Y2L1 958 aaKnown RBP13.61□□□□□ -0.23
CBWD1-220ENST00000612045 MAFBQ9Y5Q3 323 aaPredicted RBP13.61□□□□□ -0.23
CBWD1-220ENST00000612045 SLC15A5A6NIM6 579 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 TLR2O60603 784 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 TOMM70O94826 608 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 GCNT3O95395 438 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 TTLL4Q14679 1199 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 BMT2Q1RMZ1 405 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 FILIP1LQ4L180 1135 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 XKR3Q5GH77 459 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 C17orf99Q6UX52 265 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 MAMDC4Q6UXC1 1216 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 MAEAQ7L5Y9 396 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 ZNF507Q8TCN5 953 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 SCFD2Q8WU76 684 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 CEP170P1Q96L14 293 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 FIZ1Q96SL8 496 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 PDGFCQ9NRA1 345 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 MAGEC2Q9UBF1 373 aaPredicted RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 MYH9P35579 1960 aaKnown RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 PRPF6O94906 941 aaKnown RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 TXNP10599 105 aaKnown RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 ATP4AP20648 1035 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 NMT1P30419 496 aaKnown RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 HOXD13P35453 343 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 COPB1P53618 953 aaKnown RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 ODR4Q5SWX8 454 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 FAM178BQ8IXR5 827 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 SEPT1Q8WYJ6 367 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 MAML3Q96JK9 1138 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 ZFYVE28Q9HCC9 887 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 VTA1Q9NP79 307 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 TAB2Q9NYJ8 693 aa13.6□□□□□ -0.23
CBWD1-220ENST00000612045 SEPT9Q9UHD8 586 aaPredicted RBP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
CBWD1-220ENST00000612045 MYH11P35749 1972 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 N4BP3O15049 544 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 EIF3DO15371 548 aaKnown RBP eCLIP13.59□□□□□ -0.23
CBWD1-220ENST00000612045 TEX33O43247 280 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 OATP04181 439 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 TCF7P36402 384 aaPredicted RBP13.59□□□□□ -0.23
CBWD1-220ENST00000612045 TM4SF4P48230 202 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 PTPN21Q16825 1174 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 KNOP1Q1ED39 458 aaKnown RBP13.59□□□□□ -0.23
CBWD1-220ENST00000612045 TAPT1Q6NXT6 567 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 LRRC55Q6ZSA7 311 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 ZSCAN30Q86W11 494 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 DHX37Q8IY37 1157 aaKnown RBP13.59□□□□□ -0.23
CBWD1-220ENST00000612045 CNOT6LQ96LI5 555 aaKnown RBP13.59□□□□□ -0.23
CBWD1-220ENST00000612045 DRC1Q96MC2 740 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 ZIC5Q96T25 663 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 PCYT2Q99447 389 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 GPR20Q99678 358 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 KATNBL1Q9H079 304 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 VPS16Q9H269 839 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 KCNF1Q9H3M0 494 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.59□□□□□ -0.23
CBWD1-220ENST00000612045 LARSQ9P2J5 1176 aaKnown RBP13.59□□□□□ -0.23
CBWD1-220ENST00000612045 ZKSCAN5Q9Y2L8 839 aa13.59□□□□□ -0.23
CBWD1-220ENST00000612045 ZNF236Q9UL36 1845 aa13.58□□□□□ -0.23
CBWD1-220ENST00000612045 SNAI1O95863 264 aaPredicted RBP13.58□□□□□ -0.24
CBWD1-220ENST00000612045 FKBP3Q00688 224 aaKnown RBP13.58□□□□□ -0.24
CBWD1-220ENST00000612045 CRHR2Q13324 411 aa13.58□□□□□ -0.24
CBWD1-220ENST00000612045 HSDL1Q3SXM5 330 aa13.58□□□□□ -0.24
CBWD1-220ENST00000612045 MORN1Q5T089 497 aa13.58□□□□□ -0.24
CBWD1-220ENST00000612045 TMEM63BQ5T3F8 832 aa13.58□□□□□ -0.24
CBWD1-220ENST00000612045 FAM160B1Q5W0V3 765 aa13.58□□□□□ -0.24
CBWD1-220ENST00000612045 AFAP1L1Q8TED9 768 aa13.58□□□□□ -0.24
CBWD1-220ENST00000612045 COPS5Q92905 334 aa13.58□□□□□ -0.24
CBWD1-220ENST00000612045 GPRC5CQ9NQ84 441 aa13.58□□□□□ -0.24
CBWD1-220ENST00000612045 CYP26B1Q9NR63 512 aa13.58□□□□□ -0.24
CBWD1-220ENST00000612045 SLC5A4Q9NY91 659 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms