RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 KIAA1328Q86T90 577 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 ZNF280CQ8ND82 737 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 CALML4Q96GE6 196 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 CTDP1Q9Y5B0 961 aaPredicted RBP17.46■□□□□ 0.39
RTN1-209ENST00000611068 ATAD5Q96QE3 1844 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 ENC1O14682 589 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 CHMP2AO43633 222 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 GTPBP6O43824 516 aaPredicted RBP17.46■□□□□ 0.39
RTN1-209ENST00000611068 BACE1P56817 501 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 MYO1EQ12965 1108 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 FAM160B2Q86V87 743 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 SULF1Q8IWU6 871 aa17.46■□□□□ 0.39
RTN1-209ENST00000611068 RPUSD2Q8IZ73 545 aaKnown RBP17.46■□□□□ 0.39
RTN1-209ENST00000611068 SBF1O95248 1867 aa17.46■□□□□ 0.38
RTN1-209ENST00000611068 GOLGA8KD6RF30 607 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 USP2O75604 605 aaPredicted RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 CACNB1Q02641 598 aaPredicted RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 PDCD2Q16342 344 aaPredicted RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 SND1Q7KZF4 910 aaKnown RBP eCLIP17.45■□□□□ 0.38
RTN1-209ENST00000611068 MLKLQ8NB16 471 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 RNPC3Q96LT9 517 aaKnown RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 ADARB2Q9NS39 739 aaKnown RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 COL20A1Q9P218 1284 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 RIPK3Q9Y572 518 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 AKR1B15C9JRZ8 316 aaPredicted RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 WDR46O15213 610 aaKnown RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 SLC8A1P32418 973 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 CCT6AP40227 531 aaKnown RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 ASIC1P78348 528 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 CYP4A11Q02928 519 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 TTLL12Q14166 644 aaPredicted RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 KRT79Q5XKE5 535 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 TRMT1LQ7Z2T5 733 aaKnown RBP17.45■□□□□ 0.38
RTN1-209ENST00000611068 CCDC50Q8IVM0 306 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 CAPZA3Q96KX2 299 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 AK8Q96MA6 479 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 GSDMAQ96QA5 445 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 NUP58Q9BVL2 599 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 EPN3Q9H201 632 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 TRPC6Q9Y210 931 aa17.45■□□□□ 0.38
RTN1-209ENST00000611068 ABCB11O95342 1321 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 SSC5DA1L4H1 1573 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 POTEB3A0JP26 581 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 POTECB2RU33 542 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 PPP1R3GB7ZBB8 358 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 USP11P51784 963 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 APBA1Q02410 837 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 AP3B2Q13367 1082 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 PLS1Q14651 629 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 POTEBQ6S5H4 581 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 C6orf89Q6UWU4 347 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 ELOA2Q8IYF1 753 aaPredicted RBP17.44■□□□□ 0.38
RTN1-209ENST00000611068 CCT8L2Q96SF2 557 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 KIAA1024Q9UPX6 916 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 TRIM49BA6NDI0 452 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 E9PMD0 336 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 DDX39AO00148 427 aaKnown RBP17.44■□□□□ 0.38
RTN1-209ENST00000611068 SMNDC1O75940 238 aaKnown RBP eCLIP17.44■□□□□ 0.38
RTN1-209ENST00000611068 FCER1AP12319 257 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 FXR2P51116 673 aaKnown RBP eCLIP17.44■□□□□ 0.38
RTN1-209ENST00000611068 PPARDQ03181 441 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 RBL2Q08999 1139 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 USP4Q13107 963 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 VGLL4Q14135 290 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 LENG9Q96B70 501 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 CLMNQ96JQ2 1002 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 OSBPL7Q9BZF2 842 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 GLT8D2Q9H1C3 349 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 HOMER3Q9NSC5 361 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 BLOC1S4Q9NUP1 217 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 SYNPO2Q9UMS6 1093 aa17.44■□□□□ 0.38
RTN1-209ENST00000611068 MRPL11Q9Y3B7 192 aaKnown RBP17.44■□□□□ 0.38
RTN1-209ENST00000611068 MSH4O15457 936 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 UPP2O95045 317 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 IDEP14735 1019 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 MCM3P25205 808 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 SREBF1P36956 1147 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 PRCPP42785 496 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 NSMFQ6X4W1 530 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 MYCBPAPQ8TBZ2 947 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 CRYGNQ8WXF5 182 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 WDR18Q9BV38 432 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 BATF3Q9NR55 127 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 KBTBD4Q9NVX7 518 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 ZNF112Q9UJU3 913 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 NPHP3-ACAD11A0A0J9YXS1 232 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 ICAM1P05362 532 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 IL31RAQ8NI17 732 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 AENQ8WTP8 325 aaKnown RBP17.43■□□□□ 0.38
RTN1-209ENST00000611068 LPAR1Q92633 364 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 PANX2Q96RD6 677 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 TRIM10Q9UDY6 481 aa17.43■□□□□ 0.38
RTN1-209ENST00000611068 GOLGA6L7A0A1B0GV03 622 aa17.42■□□□□ 0.38
RTN1-209ENST00000611068 POTEFA5A3E0 1075 aa17.42■□□□□ 0.38
RTN1-209ENST00000611068 TEX33O43247 280 aa17.42■□□□□ 0.38
RTN1-209ENST00000611068 RTN3O95197 1032 aaPredicted RBP17.42■□□□□ 0.38
RTN1-209ENST00000611068 POTEIP0CG38 1075 aa17.42■□□□□ 0.38
RTN1-209ENST00000611068 SUPT20HL1Q3ZLR7 823 aa17.42■□□□□ 0.38
RTN1-209ENST00000611068 FKBP15Q5T1M5 1219 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms