RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	NBN	O60934	754 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	PARN	O95453	639 aa	Known RBP	15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	CCDC192	P0DO97	292 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	HOXD8	P13378	290 aa	Predicted RBP	15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	RBL2	Q08999	1139 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	AP3B2	Q13367	1082 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ORC2	Q13416	577 aa	Predicted RBP	15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	GPNMB	Q14956	572 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SKIV2L	Q15477	1246 aa	Known RBP	15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	IL17A	Q16552	155 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	MCTP2	Q6DN12	878 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	CYFIP1	Q7L576	1253 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TIGD1	Q96MW7	591 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ANO3	Q9BYT9	981 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	BCAS3	Q9H6U6	928 aa		15.2	■□□□□ 0.02
PPHLN1-223	ENST00000610488	PRRC2B	Q5JSZ5	2229 aa	Known RBP	15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	STAM2	O75886	525 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ARHGEF15	O94989	841 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	LGALS2	P05162	132 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	THPO	P40225	353 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	DEFB103A	P81534	67 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TAP1	Q03518	808 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	NEDD9	Q14511	834 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	HIC1	Q14526	733 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TCTN1	Q2MV58	587 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TRIM71	Q2Q1W2	868 aa	Known RBP	15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	UTP14C	Q5TAP6	766 aa	Known RBP	15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SASS6	Q6UVJ0	657 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	DTHD1	Q6ZMT9	781 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	USP49	Q70CQ1	688 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ATP6V0A1	Q93050	837 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	EPSTI1	Q96J88	318 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	C16orf70	Q9BSU1	422 aa		15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TSPYL2	Q9H2G4	693 aa	Predicted RBP	15.19	■□□□□ 0.02
PPHLN1-223	ENST00000610488	EPOP	A6NHQ4	379 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488		H3BRB1	525 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	GTPBP6	O43824	516 aa	Predicted RBP	15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	CXCL10	P02778	98 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	OR52Z1	P0C646	297 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SMIM10L2A	P0DMW4	78 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SMIM10L2B	P0DMW5	78 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	LONP1	P36776	959 aa	Known RBP	15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	PRPH	P41219	470 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TYRO3	Q06418	890 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SEMA3F	Q13275	785 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	FAM117B	Q6P1L5	589 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	METTL7B	Q6UX53	244 aa		15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ATXN2L	Q8WWM7	1075 aa	Known RBP	15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	INPP4A	Q96PE3	977 aa	Predicted RBP	15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TUT1	Q9H6E5	874 aa	Known RBP	15.18	■□□□□ 0.02
PPHLN1-223	ENST00000610488	LCHN	A4D1U4	455 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SPDYE3	A6NKU9	549 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	POLR2D	O15514	142 aa	Known RBP	15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	EDIL3	O43854	480 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TDP2	O95551	362 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	FOS	P01100	380 aa	Predicted RBP	15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	XRCC6	P12956	609 aa	Known RBP eCLIP	15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ICAM3	P32942	547 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	IKBKE	Q14164	716 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	LONRF3	Q496Y0	759 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	PCNX4	Q63HM2	1172 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	KRBA2	Q6ZNG9	492 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TRIM50	Q86XT4	487 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	POTED	Q86YR6	584 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	PDILT	Q8N807	584 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	RNF214	Q8ND24	703 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	CNNM3	Q8NE01	707 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	PANK2	Q9BZ23	570 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	NLRC5	Q86WI3	1866 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ABHD14A-ACY1	A0A1B0GW23	586 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SPATA31C2	B4DYI2	1134 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	PIK3CD	O00329	1044 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TREH	O43280	583 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SLC37A4	O43826	429 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	CTSH	P09668	335 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	MRPS5	P82675	430 aa	Known RBP	15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	CALCRL	Q16602	461 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	PPP4R3A	Q6IN85	833 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TRAF7	Q6Q0C0	670 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SPRED2	Q7Z698	418 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	NLRX1	Q86UT6	975 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SERINC5	Q86VE9	423 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ERCC4	Q92889	916 aa	Predicted RBP	15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ASB2	Q96Q27	587 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	GPR20	Q99678	358 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	NAP1L4	Q99733	375 aa	Known RBP	15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	PKD2L1	Q9P0L9	805 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	SERTAD1	Q9UHV2	236 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	ZNF215	Q9UL58	517 aa	Predicted RBP	15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	MTUS1	Q9ULD2	1270 aa		15.17	■□□□□ 0.02
PPHLN1-223	ENST00000610488	RSPH10B2	B2RC85	870 aa		15.16	■□□□□ 0.02
PPHLN1-223	ENST00000610488	LGR5	O75473	907 aa		15.16	■□□□□ 0.02
PPHLN1-223	ENST00000610488	RSPH10B	P0C881	870 aa		15.16	■□□□□ 0.02
PPHLN1-223	ENST00000610488	GCFC2	P16383	781 aa	Known RBP	15.16	■□□□□ 0.02
PPHLN1-223	ENST00000610488	USP11	P51784	963 aa		15.16	■□□□□ 0.02
PPHLN1-223	ENST00000610488	MBTPS1	Q14703	1052 aa		15.16	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TEX2	Q8IWB9	1127 aa		15.16	■□□□□ 0.02
PPHLN1-223	ENST00000610488	DDX25	Q9UHL0	483 aa	Known RBP	15.16	■□□□□ 0.02
PPHLN1-223	ENST00000610488	TELO2	Q9Y4R8	837 aa		15.16	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms