RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TGM1P22735 817 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 NKX3-2P78367 333 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 IRF9Q00978 393 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 TUSC3Q13454 348 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 FIGNQ5HY92 759 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 KCTD1Q719H9 257 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 RBM12BQ8IXT5 1001 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 KYQ8NBH2 561 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 GPR101Q96P66 508 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 GORASP1Q9BQQ3 440 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 YIPF4Q9BSR8 244 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 C11orf84Q9BUA3 381 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 IFT22Q9H7X7 185 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 THG1LQ9NWX6 298 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 ATP23Q9Y6H3 246 aa5.96□□□□□ -1.46
SMCHD1-213ENST00000609587 H7C1D1 291 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 SCDO00767 359 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 NEMP1O14524 444 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 ZEB2O60315 1214 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 BRINP1O60477 761 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 CLASP2O75122 1294 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 HIP1RO75146 1068 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 FKBP9O95302 570 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 EYA4O95677 639 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 LRG1P02750 347 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 LTFP02788 710 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 ZBTB48P10074 688 aaPredicted RBP5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 ATP2A2P16615 1042 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 BPIP17213 487 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 THBS2P35442 1172 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 STAT5AP42229 794 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 CDKN1CP49918 316 aaPredicted RBP5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 EPHA5P54756 1037 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 OCRLQ01968 901 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 TEPPQ6URK8 271 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 GLB1LQ6UWU2 654 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 USP51Q70EK9 711 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 FKBP9P1Q75LS8 142 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 TTLL6Q8N841 843 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 PRPF38AQ8NAV1 312 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 SMC1BQ8NDV3 1235 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 CHTF18Q8WVB6 975 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 CLEC4DQ8WXI8 215 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 KLC2Q9H0B6 622 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 CD248Q9HCU0 757 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 ZNF536O15090 1300 aa5.95□□□□□ -1.46
SMCHD1-213ENST00000609587 HSP90B1P14625 803 aaKnown RBP5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 RPL13P26373 211 aaKnown RBP5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 ADCYAP1R1P41586 468 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 LSSP48449 732 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 KPNA1P52294 538 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 ITGA1P56199 1179 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 EVA1CP58658 441 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 STAT4Q14765 748 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 ZNF174Q15697 407 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 FAM26FQ5R3K3 315 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 BTBD8Q5XKL5 378 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 C11orf74Q86VG3 221 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 NOSTRINQ8IVI9 506 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 RPUSD2Q8IZ73 545 aaKnown RBP5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 WDR66Q8TBY9 1149 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 SYT3Q9BQG1 590 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 OXSMQ9NWU1 459 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 APOBEC2Q9Y235 224 aaKnown RBP5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 TELO2Q9Y4R8 837 aa5.94□□□□□ -1.46
SMCHD1-213ENST00000609587 MROH6A6NGR9 719 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 HMGB1P09429 215 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 PTPN1P18031 435 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 GJA4P35212 333 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 ID4P47928 161 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 GRIN1Q05586 938 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 FSTL4Q6MZW2 842 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 BORAQ6PGQ7 559 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 LHFPL2Q6ZUX7 228 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 SPTLC3Q9NUV7 552 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 RIC8BQ9NVN3 520 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 H2AFY2Q9P0M6 372 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 PPP4R1LQ9P1A2 415 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 B3GALT1Q9Y5Z6 326 aa5.93□□□□□ -1.46
SMCHD1-213ENST00000609587 FAM90A27PA6NNH2 459 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 ALG1L2C9J202 215 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 GPR39O43194 453 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 AMHP03971 560 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 KIF11P52732 1056 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 FAM50AQ14320 339 aaKnown RBP5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 TMEM132BQ14DG7 1078 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 ATP13A4Q4VNC1 1196 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 PAN2Q504Q3 1202 aaKnown RBP5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 PRR31Q5SQ13 230 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 RNF219Q5W0B1 726 aaPredicted RBP5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 CREB3L3Q68CJ9 461 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 PASD1Q8IV76 773 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 EFHBQ8N7U6 833 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 KIAA1958Q8N8K9 716 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 DLG3Q92796 817 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 TMEM209Q96SK2 561 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 PCIF1Q9H4Z3 704 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 EMC7Q9NPA0 242 aa5.92□□□□□ -1.46
SMCHD1-213ENST00000609587 KCNH7Q9NS40 1196 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms