RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 TMEM259Q4ZIN3 620 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 HSP90AA4PQ58FG1 418 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 METTL21CQ5VZV1 264 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CLVS1Q8IUQ0 354 aaPredicted RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CACNA2D3Q8IZS8 1091 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CARNMT1Q8N4J0 409 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 HERVK_113Q902F9 699 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 MED30Q96HR3 178 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 NUP62CLQ9H1M0 184 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ATP13A3Q9H7F0 1226 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 TBCCD1Q9NVR7 557 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 DDX56Q9NY93 547 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 EHD2Q9NZN4 543 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CFL2Q9Y281 166 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ASB3Q9Y575 518 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CDHR2Q9BYE9 1310 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CTAGE15A4D2H0 777 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CCDC160A6NGH7 325 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 E7EVH7 732 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 TBX3O15119 743 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 SHOX2O60902 331 aaPredicted RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CTAGE8P0CG41 777 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CALM1P0DP23 149 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CALM2P0DP24 149 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CALM3P0DP25 149 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 KRT9P35527 623 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ACADSBP45954 432 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 EIF2B2P49770 351 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 B2MP61769 119 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 GPSM2P81274 684 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 LMNB2Q03252 620 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 FAM69CQ0P6D2 419 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 SP140Q13342 867 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 IFI16Q16666 785 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 INSCQ1MX18 579 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 EGFLAMQ63HQ2 1017 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 TRIM67Q6ZTA4 783 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CPLX4Q7Z7G2 160 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CTAGE6Q86UF2 777 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 FAM228AQ86W67 206 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CTAGE4Q8IX94 777 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CCDC12Q8WUD4 166 aaPredicted RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 SEPT1Q8WYJ6 367 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ERP44Q9BS26 406 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 MXD3Q9BW11 206 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 SEMA4AQ9H3S1 761 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 OCEL1Q9H607 264 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ATP6V1HQ9UI12 483 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 VANGL2Q9ULK5 521 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 GIT1Q9Y2X7 761 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 PRKAB1Q9Y478 270 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 RGPD2P0DJD1 1756 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 LRRC37A3O60309 1634 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CFAP73A6NFT4 308 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 LRRIQ4A6NIV6 560 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 F8W031 263 aaPredicted RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CHGBP05060 677 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 KCNA6P17658 529 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ALAS2P22557 587 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 MZF1P28698 734 aaPredicted RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 NR2C2P49116 596 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 SARSP49591 514 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 KPNA1P52294 538 aaPredicted RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 STAT2P52630 851 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 PPP2R2AP63151 447 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 NOP14P78316 857 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 GUCY2DQ02846 1103 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 AP1B1Q10567 949 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CCDC14Q49A88 953 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ANGPTL8Q6UXH0 198 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ZNF598Q86UK7 904 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 PLA2G4DQ86XP0 818 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 HACE1Q8IYU2 909 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 DIS3LQ8TF46 1054 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 SLC7A3Q8WY07 619 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 PGBD4Q96DM1 585 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 CFAP57Q96MR6 1250 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 TTC25Q96NG3 672 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 OLFM3Q96PB7 478 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 TBCBQ99426 244 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 SLAIN2Q9P270 581 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ZMYND8Q9ULU4 1186 aaPredicted RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 SLC8A2Q9UPR5 921 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 NKTRP30414 1462 aaKnown RBP5.1□□□□□ -1.59
HDDC2-208ENST00000609021 UBN2Q6ZU65 1347 aa5.1□□□□□ -1.59
HDDC2-208ENST00000609021 ZSCAN5BA6NJL1 495 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 HNRNPCL2B2RXH8 293 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 KMOO15229 486 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 PER1O15534 1290 aaPredicted RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 HNRNPCL1O60812 293 aaKnown RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 COBLO75128 1261 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ZC3H11AO75152 810 aaKnown RBP eCLIP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ITGA2BP08514 1039 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SP100P23497 879 aaPredicted RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 CDC25BP30305 580 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SOX5P35711 763 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 PPP1R2P41236 205 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ELF3P78545 371 aaPredicted RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 KRT76Q01546 638 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 MAP3K12Q12852 859 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms