RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 EXOC1Q9NV70 894 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 MAGEC2Q9UBF1 373 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-218ENST00000608440 RNF14Q9UBS8 474 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 HAO1Q9UJM8 370 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 SH3GLB1Q9Y371 365 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 OAS1P00973 400 aaKnown RBP13.61□□□□□ -0.23
CTCFL-218ENST00000608440 ASLP04424 464 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 GUCY1A2P33402 732 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 DNM2P50570 870 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 RTP1P59025 263 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 CERKLQ49MI3 558 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-218ENST00000608440 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 SH2D4BQ5SQS7 431 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 ATP11CQ8NB49 1132 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 PIGBQ92521 554 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 LENG1Q96BZ8 264 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-218ENST00000608440 ZNF653Q96CK0 615 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 HAUS7Q99871 368 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 CABP5Q9NP86 173 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 PDP2Q9P2J9 529 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 USP20Q9Y2K6 914 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 MAST3O60307 1309 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 RGS16O15492 202 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-218ENST00000608440 EPHB2P29323 1055 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 VHLP40337 213 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 SLC1A4P43007 532 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 OXCT1P55809 520 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 NANOGNBQ7Z5D8 188 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 SCUBE1Q8IWY4 988 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
CTCFL-218ENST00000608440 TRIM47Q96LD4 638 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 AMACRQ9UHK6 382 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 ASAP1Q9ULH1 1129 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 ARL2BPQ9Y2Y0 163 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 WNK3Q9BYP7 1800 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 PDS5AQ29RF7 1337 aaKnown RBP13.6□□□□□ -0.23
CTCFL-218ENST00000608440 BOLA2-SMG1P6H3BVE0 249 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 H7C1D1 291 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 SRGNP10124 158 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 MYBP10242 640 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 SLC44A4Q53GD3 710 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 ZNF554Q86TJ5 538 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 VSIG1Q86XK7 387 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 TRIM50Q86XT4 487 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 MAP7D3Q8IWC1 876 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 MB21D2Q8IYB1 491 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-218ENST00000608440 FAM133AQ8N9E0 248 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 GATA6Q92908 595 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 NMD3Q96D46 503 aaKnown RBP13.6□□□□□ -0.23
CTCFL-218ENST00000608440 TUBGCP2Q9BSJ2 902 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 DENND2DQ9H6A0 471 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-218ENST00000608440 TDRKHQ9Y2W6 561 aaKnown RBP13.6□□□□□ -0.23
CTCFL-218ENST00000608440 SLC4A7Q9Y6M7 1214 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 COMMD3-BMI1R4GMX3 469 aa13.6□□□□□ -0.23
CTCFL-218ENST00000608440 XDHP47989 1333 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 MYH1P12882 1939 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 SIGLEC16A6NMB1 481 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 KCNK3O14649 394 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 PYGMP11217 842 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 CCNB1P14635 433 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 ITGA6P23229 1130 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 VARSP26640 1264 aaKnown RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 SERPINB3P29508 390 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 HOXD12P35452 270 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 MGAT5Q09328 741 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 MAP7D1Q3KQU3 841 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 ZNF449Q6P9G9 518 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 NKX2-3Q8TAU0 364 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 XAGE3Q8WTP9 111 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 NCSTNQ92542 709 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 HAUS1Q96CS2 278 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 IQCDQ96DY2 449 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 MPP4Q96JB8 637 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 INPP4AQ96PE3 977 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 FAM207AQ9NSI2 230 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 FAM98CQ17RN3 349 aaKnown RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 LIN52Q52LA3 116 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 RILPL1Q5EBL4 403 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 C3orf67Q6ZVT6 689 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 RIBC1Q8N443 379 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 ENDOVQ8N8Q3 282 aaKnown RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 ANKLE1Q8NAG6 615 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 NCOA7Q8NI08 942 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 NRG4Q8WWG1 115 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 RNF25Q96BH1 459 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 AGAP3Q96P47 875 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 NR1H4Q96RI1 486 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 HAPLN3Q96S86 360 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 SIKE1Q9BRV8 207 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 CELF4Q9BZC1 486 aaKnown RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 STOML1Q9UBI4 398 aa13.59□□□□□ -0.23
CTCFL-218ENST00000608440 ANGEL1Q9UNK9 670 aaKnown RBP13.59□□□□□ -0.23
CTCFL-218ENST00000608440 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms