RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 SMIM35A0A1B0GVV1 85 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 MED24O75448 989 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 EPHB4P54760 987 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 PPIGQ13427 754 aaKnown RBP eCLIP25.81■■□□□ 1.72
SNX5-217ENST00000606557 PTPAQ15257 358 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 MTERF2Q49AM1 385 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 CATSPER3Q86XQ3 398 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 DNAJB3Q8WWF6 145 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 USP28Q96RU2 1077 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 CEP89Q96ST8 783 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 POLR3CQ9BUI4 534 aaPredicted RBP25.81■■□□□ 1.72
SNX5-217ENST00000606557 TUFT1Q9NNX1 390 aa25.81■■□□□ 1.72
SNX5-217ENST00000606557 YWHABP31946 246 aaKnown RBP25.8■■□□□ 1.72
SNX5-217ENST00000606557 HAUS3Q68CZ6 603 aa25.8■■□□□ 1.72
SNX5-217ENST00000606557 PLA2G4FQ68DD2 849 aa25.8■■□□□ 1.72
SNX5-217ENST00000606557 VWCEQ96DN2 955 aa25.8■■□□□ 1.72
SNX5-217ENST00000606557 UBE2OQ9C0C9 1292 aaKnown RBP25.8■■□□□ 1.72
SNX5-217ENST00000606557 FAM49AQ9H0Q0 323 aaPredicted RBP25.8■■□□□ 1.72
SNX5-217ENST00000606557 VWA3AA6NCI4 1184 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 MAGEB2O15479 319 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 BRD1O95696 1058 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 RPLP2P05387 115 aaKnown RBP25.79■■□□□ 1.72
SNX5-217ENST00000606557 CTSHP09668 335 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 RPA1P27694 616 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 RFC2P35250 354 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 SH2D3AQ9BRG2 576 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 IL23AQ9NPF7 189 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 CYP26B1Q9NR63 512 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 COLQQ9Y215 455 aaPredicted RBP25.79■■□□□ 1.72
SNX5-217ENST00000606557 ZDHHC9Q9Y397 364 aa25.79■■□□□ 1.72
SNX5-217ENST00000606557 TCHHQ07283 1943 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 PP2D1A8MPX8 630 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 RSPH10B2B2RC85 870 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 ZBTB39O15060 712 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 RSPH10BP0C881 870 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 NPEPPSP55786 919 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 CEBPZQ03701 1054 aaKnown RBP25.78■■□□□ 1.72
SNX5-217ENST00000606557 TBC1D8BQ0IIM8 1120 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 MBTPS1Q14703 1052 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 GPNMBQ14956 572 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 FAM26DQ5JW98 314 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 RSPH3Q86UC2 560 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 LINC01465Q8N7H1 131 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 STK24Q9Y6E0 443 aa25.78■■□□□ 1.72
SNX5-217ENST00000606557 PARNO95453 639 aaKnown RBP25.77■■□□□ 1.72
SNX5-217ENST00000606557 CCT6AP40227 531 aaKnown RBP25.77■■□□□ 1.72
SNX5-217ENST00000606557 NASPP49321 788 aaPredicted RBP25.77■■□□□ 1.72
SNX5-217ENST00000606557 MGAT3Q09327 533 aa25.77■■□□□ 1.72
SNX5-217ENST00000606557 POTEGQ6S5H5 508 aa25.77■■□□□ 1.72
SNX5-217ENST00000606557 C16orf59Q7L2K0 433 aa25.77■■□□□ 1.72
SNX5-217ENST00000606557 OTUD6AQ7L8S5 288 aa25.77■■□□□ 1.72
SNX5-217ENST00000606557 KIAA0319LQ8IZA0 1049 aa25.77■■□□□ 1.72
SNX5-217ENST00000606557 ZNF579Q8NAF0 562 aaKnown RBP25.77■■□□□ 1.72
SNX5-217ENST00000606557 SNX29Q8TEQ0 813 aa25.77■■□□□ 1.72
SNX5-217ENST00000606557 PPME1Q9Y570 386 aa25.77■■□□□ 1.72
SNX5-217ENST00000606557 MORC2Q9Y6X9 1032 aaPredicted RBP25.77■■□□□ 1.72
SNX5-217ENST00000606557 NBNO60934 754 aa25.76■■□□□ 1.71
SNX5-217ENST00000606557 ACRP10323 421 aa25.76■■□□□ 1.71
SNX5-217ENST00000606557 MUTP22033 750 aa25.76■■□□□ 1.71
SNX5-217ENST00000606557 MRPS6P82932 125 aaKnown RBP25.76■■□□□ 1.71
SNX5-217ENST00000606557 ECM1Q16610 540 aa25.76■■□□□ 1.71
SNX5-217ENST00000606557 EFCAB12Q6NXP0 572 aa25.76■■□□□ 1.71
SNX5-217ENST00000606557 DEFB128Q7Z7B8 93 aa25.76■■□□□ 1.71
SNX5-217ENST00000606557 METTL13Q8N6R0 699 aa25.76■■□□□ 1.71
SNX5-217ENST00000606557 CEP170P1Q96L14 293 aa25.76■■□□□ 1.71
SNX5-217ENST00000606557 ZNF396Q96N95 335 aaPredicted RBP25.76■■□□□ 1.71
SNX5-217ENST00000606557 MMTAG2Q9BU76 263 aaKnown RBP25.76■■□□□ 1.71
SNX5-217ENST00000606557 ANKEF1Q9NU02 776 aa25.76■■□□□ 1.71
SNX5-217ENST00000606557 MICAL3Q7RTP6 2002 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 IGKV6-21A0A0C4DH24 114 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 MAFO75444 373 aaPredicted RBP25.75■■□□□ 1.71
SNX5-217ENST00000606557 CHRNA1P02708 482 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 PFKMP08237 780 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 CDC25AP30304 524 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 CLCN3P51790 818 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 GRIN1Q05586 938 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 XKR9Q5GH70 373 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 KRT79Q5XKE5 535 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 RPUSD2Q8IZ73 545 aaKnown RBP25.75■■□□□ 1.71
SNX5-217ENST00000606557 NME8Q8N427 588 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 LRRC71Q8N4P6 559 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 PIGOQ8TEQ8 1089 aa25.75■■□□□ 1.71
SNX5-217ENST00000606557 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.75■■□□□ 1.711e-58■□□□□ 9.9
SNX5-217ENST00000606557 TRIOBPQ9H2D6 2365 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 CXCL10P02778 98 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 XRCC6P12956 609 aaKnown RBP eCLIP25.74■■□□□ 1.71
SNX5-217ENST00000606557 MARCKSP29966 332 aaPredicted RBP25.74■■□□□ 1.71
SNX5-217ENST00000606557 DDIT3P35638 169 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 TMEM62Q0P6H9 643 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 SLC39A14Q15043 492 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 TMEM240Q5SV17 173 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 C9orf50Q5SZB4 431 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 PSRC1Q6PGN9 363 aaPredicted RBP25.74■■□□□ 1.71
SNX5-217ENST00000606557 AK8Q96MA6 479 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 NACC1Q96RE7 527 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 FBXO2Q9UK22 296 aaPredicted RBP25.74■■□□□ 1.71
SNX5-217ENST00000606557 CDY2AQ9Y6F7 541 aa25.74■■□□□ 1.71
SNX5-217ENST00000606557 PTPRSQ13332 1948 aa25.73■■□□□ 1.71
SNX5-217ENST00000606557 A0A087WWV3 80 aa25.73■■□□□ 1.71
SNX5-217ENST00000606557 TMOD1P28289 359 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms