RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 FAM43BQ6ZT52 329 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-212ENST00000604599 OTUD6AQ7L8S5 288 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 KCNK18Q7Z418 384 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 NAF1Q96HR8 494 aaKnown RBP13.5□□□□□ -0.25
CDCA3-212ENST00000604599 SEMA4AQ9H3S1 761 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 RIC8AQ9NPQ8 531 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 BARHL2Q9NY43 387 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 DBR1Q9UK59 544 aaKnown RBP13.5□□□□□ -0.25
CDCA3-212ENST00000604599 A6NHS1 94 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 FGFR4P22455 802 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 NAPAP54920 295 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 GALNTL6Q49A17 601 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 SLC30A9Q6PML9 568 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 IRF2BP2Q7Z5L9 587 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 NT5DC3Q86UY8 548 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 NUDT12Q9BQG2 462 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 ERVK-5Q9HDB9 667 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 DAAM1Q9Y4D1 1078 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 DPPA5A6NC42 116 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 LIN7AO14910 233 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-212ENST00000604599 PCP11498 1178 aaKnown RBP13.5□□□□□ -0.25
CDCA3-212ENST00000604599 SLC9A1P19634 815 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 RAB27AP51159 221 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 CNGA2Q16280 664 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 ZCWPW2Q504Y3 356 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 NUGGCQ68CJ6 796 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 NEK8Q86SG6 692 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 TRIM59Q8IWR1 403 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 PROM2Q8N271 834 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 DAGLBQ8NCG7 672 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 SLC17A8Q8NDX2 589 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 ZNF384Q8TF68 577 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 ERP44Q9BS26 406 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 ARHGEF3Q9NR81 526 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 COL18A1P39060 1754 aa13.5□□□□□ -0.25
CDCA3-212ENST00000604599 KAT6BQ8WYB5 2073 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 SUN1O94901 812 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 OAS1P00973 400 aaKnown RBP13.49□□□□□ -0.25
CDCA3-212ENST00000604599 AGTP01019 485 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 NEFHP12036 1026 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 KLRC3Q07444 240 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 COASYQ13057 564 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 ZNF211Q13398 564 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-212ENST00000604599 DUPD1Q68J44 220 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 FITM2Q8N6M3 262 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 TBCKQ8TEA7 893 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 CCDC134Q9H6E4 229 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 OSGEPQ9NPF4 335 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 SUCLA2Q9P2R7 463 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-212ENST00000604599 MAD2L2Q9UI95 211 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 LRP5O75197 1615 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 MAP3K13O43283 966 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 PDHA1P08559 390 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 GNAT1P11488 350 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 TFAP4Q01664 338 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 SEPT2Q15019 361 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 IFT74Q96LB3 600 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 TSC22D3Q99576 134 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-212ENST00000604599 NKX1-2Q9UD57 310 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-212ENST00000604599 STK17AQ9UEE5 414 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 ZMYND8Q9ULU4 1186 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-212ENST00000604599 STXBP5LQ9Y2K9 1186 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 RPTORQ8N122 1335 aa13.49□□□□□ -0.25
CDCA3-212ENST00000604599 CACNA1SQ13698 1873 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 A0A1B0GUL6 1792 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 SMIM24O75264 130 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 STARD3NLO95772 234 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 FESP07332 822 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 KRT13P13646 458 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 TUBP50607 506 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 PTENP60484 403 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-212ENST00000604599 CHRNDQ07001 517 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 KCNH2Q12809 1159 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 DCAF12L1Q5VU92 463 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 RAD54LQ92698 747 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 TMOD3Q9NYL9 352 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 COL22A1Q8NFW1 1626 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-212ENST00000604599 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-212ENST00000604599 RREB1Q92766 1687 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 SPDYE5A6NIY4 337 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 FLOT1O75955 427 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 H2AFZP0C0S5 128 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 CREB1P16220 341 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 SPDYCQ5MJ68 293 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 FAM26FQ5R3K3 315 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 C10orf76Q5T2E6 689 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 C6orf118Q5T5N4 469 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 ZDHHC24Q6UX98 284 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 H2AFVQ71UI9 128 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 KRT25Q7Z3Z0 450 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 ANKRD42Q8N9B4 389 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 HES6Q96HZ4 224 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 RMDN2Q96LZ7 410 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 PAPOLBQ9NRJ5 636 aaKnown RBP13.48□□□□□ -0.25
CDCA3-212ENST00000604599 IL17RBQ9NRM6 502 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms