RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 HNRNPH2P55795 449 aaKnown RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 HDAC4P56524 1084 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 MRPS25P82663 173 aaKnown RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 CAV1Q03135 178 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 SLFNL1Q499Z3 407 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 ZNF589Q86UQ0 364 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 HEXIM2Q96MH2 286 aaKnown RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 COG4Q9H9E3 785 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 ARHGAP10A1A4S6 786 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 KRT38O76015 456 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 CAPRIN2Q6IMN6 1127 aaKnown RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 SCARA5Q6ZMJ2 495 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 ECT2Q9H8V3 914 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 MEIS1O00470 390 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 PODXLO00592 558 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 WDR11Q9BZH6 1224 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 PCIF1Q9H4Z3 704 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 INPP5FQ9Y2H2 1132 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 hCG_2014768A0A024R1R8 64 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 SMARCA1P28370 1054 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 KIF23Q02241 960 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 RARS2Q5T160 578 aaKnown RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 RHOT2Q8IXI1 618 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 TBCKQ8TEA7 893 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 RP1L1Q8IWN7 2480 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 CCDC188H7C350 402 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 SERPINB10P48595 397 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 ALCAMQ13740 583 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 KCTD1Q719H9 257 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 PARP9Q8IXQ6 854 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 NDST4Q9H3R1 872 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 LRRC4Q9HBW1 653 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 NR5A1Q13285 461 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 CCDC92Q53HC0 331 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 RAPGEF5Q92565 580 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 OSBPL1AQ9BXW6 950 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 CIAO1O76071 339 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 GNL1P36915 607 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 UBE3CQ15386 1083 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 TEDDM1Q5T9Z0 273 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 BZW1Q7L1Q6 419 aaKnown RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 SNX19Q92543 992 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 ABCF3Q9NUQ8 709 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 SNX5Q9Y5X3 404 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 CD2BP2O95400 341 aaKnown RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 KITP10721 976 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 PPARGP37231 505 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 RWDD4Q6NW29 188 aaKnown RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 LINC00301Q8NCQ3 95 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 YIPF3Q9GZM5 350 aa10.28□□□□□ -0.76
CSMD1-217ENST00000602723 DIS3Q9Y2L1 958 aaKnown RBP10.28□□□□□ -0.76
CSMD1-217ENST00000602723 hCG_1984214I3L0E3 225 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 PLA2G4BP0C869 781 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 MAP3K7CLP57077 242 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 CDC37Q16543 378 aaPredicted RBP10.27□□□□□ -0.76
CSMD1-217ENST00000602723 NCAPG2Q86XI2 1143 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 EXOC8Q8IYI6 725 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 ZNF713Q8N859 430 aaPredicted RBP10.27□□□□□ -0.76
CSMD1-217ENST00000602723 BEGAINQ9BUH8 593 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 QRICH2Q9H0J4 1663 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 PSMC1P62191 440 aaKnown RBP10.27□□□□□ -0.76
CSMD1-217ENST00000602723 WDR75Q8IWA0 830 aaKnown RBP10.27□□□□□ -0.76
CSMD1-217ENST00000602723 LZICQ8WZA0 190 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 STAP2Q9UGK3 403 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 TCP10L2B9ZVM9 353 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 PHKA1P46020 1223 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 ANO5Q75V66 913 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 OR9Q1Q8NGQ5 310 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 ADA2Q9NZK5 511 aa10.27□□□□□ -0.76
CSMD1-217ENST00000602723 ANXA13P27216 316 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 PPP2R2AP63151 447 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 RESP18Q5W5W9 173 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 MTBPQ96DY7 904 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 FAM47EQ6ZV65 393 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 MLXIPLQ9NP71 852 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 GTSE1Q9NYZ3 720 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 RCOR1Q9UKL0 485 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 LRRC24Q50LG9 513 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 ABI1Q8IZP0 508 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 RNF139Q8WU17 664 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 DCTN4Q9UJW0 460 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 WDR17Q8IZU2 1322 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 ATP1A3P13637 1013 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 KIAA0825Q8IV33 1275 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 GOLGA8MH3BSY2 632 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 SRGAP2O75044 1071 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 Q3C1V9 767 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 FSD1LQ9BXM9 530 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 ASPSCR1Q9BZE9 553 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 LMTK3Q96Q04 1460 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 CFAP73A6NFT4 308 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 RASSF10A6NK89 507 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 SH2B2O14492 632 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-217ENST00000602723 SEMA3EO15041 775 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 TMCC1O94876 653 aa10.27□□□□□ -0.77
CSMD1-217ENST00000602723 EAPPQ56P03 285 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-217ENST00000602723 CC2D1AQ6P1N0 951 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms