RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 BRCA2P51587 3418 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 A0A1B0GVL5 298 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 C17orf102A2RUQ5 167 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 PFKFB1P16118 471 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 RARRES1P49788 294 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 ADAM17P78536 824 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 LRRC26Q2I0M4 334 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 TRIM60Q495X7 471 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 NAALADL2Q58DX5 795 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 XKR9Q5GH70 373 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 ZNF484Q5JVG2 852 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 MARCH8Q5T0T0 291 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 PDILTQ8N807 584 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 FSIP1Q8NA03 581 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 RASSF8Q8NHQ8 419 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 GBP4Q96PP9 640 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 CTAGE1Q96RT6 745 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 NT5C3AQ9H0P0 336 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 BLOC1S4Q9NUP1 217 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 FAM13BQ9NYF5 915 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 CCDC39Q9UFE4 941 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 COL1A2P08123 1366 aa22.35■■□□□ 1.17
SHKBP1-222ENST00000600320 NRCAMQ92823 1304 aa22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 FAM237AA0A1B0GTK4 181 aa22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 XRCC6P12956 609 aaKnown RBP eCLIP22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 PTPN11Q06124 597 aaPredicted RBP22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 CEP170P1Q96L14 293 aa22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 CYP26B1Q9NR63 512 aa22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 TRMT13Q9NUP7 481 aaKnown RBP22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 DBR1Q9UK59 544 aaKnown RBP22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 HPSEQ9Y251 543 aa22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 ARID2Q68CP9 1835 aa22.34■■□□□ 1.17
SHKBP1-222ENST00000600320 TRIP12Q14669 1992 aaPredicted RBP22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 TREHO43280 583 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 B4GALT4O60513 344 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 PRPF40AO75400 957 aaKnown RBP22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 EYA4O95677 639 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 E2F4Q16254 413 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 C1orf53Q5VUE5 145 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 RRAGBQ5VZM2 374 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 OTUD6AQ7L8S5 288 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 FAM126BQ8IXS8 530 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 MRPS27Q92552 414 aaKnown RBP22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 TRPV6Q9H1D0 765 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 BHMT2Q9H2M3 363 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 KCNH3Q9ULD8 1083 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 DNM3Q9UQ16 869 aa22.33■■□□□ 1.17
SHKBP1-222ENST00000600320 RRN3P2A6NIE6 340 aa22.32■■□□□ 1.16
SHKBP1-222ENST00000600320 C22orf31O95567 290 aa22.32■■□□□ 1.16
SHKBP1-222ENST00000600320 KLRC1P26715 233 aa22.32■■□□□ 1.16
SHKBP1-222ENST00000600320 NDUFA8P51970 172 aa22.32■■□□□ 1.16
SHKBP1-222ENST00000600320 RTP1P59025 263 aa22.32■■□□□ 1.16
SHKBP1-222ENST00000600320 CCDC73Q6ZRK6 1079 aa22.32■■□□□ 1.16
SHKBP1-222ENST00000600320 RAD54LQ92698 747 aa22.32■■□□□ 1.16
SHKBP1-222ENST00000600320 DHX58Q96C10 678 aa22.32■■□□□ 1.16
SHKBP1-222ENST00000600320 BMP2KQ9NSY1 1161 aaPredicted RBP22.32■■□□□ 1.16
SHKBP1-222ENST00000600320 KAT6AQ92794 2004 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 MBLAC1A4D2B0 266 aaPredicted RBP22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 GOLGA6L4A6NEF3 574 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 POLR2DO15514 142 aaKnown RBP22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 PQBP1O60828 265 aaKnown RBP22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 PLA2G4BP0C869 781 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 STAT6P42226 847 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 TLE2Q04725 743 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 MCM6Q14566 821 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 PTGISQ16647 500 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 MTHFD1LQ6UB35 978 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 RUFY4Q6ZNE9 571 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 KCTD17Q8N5Z5 321 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 WNT8BQ93098 351 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 SEZ6LQ9BYH1 1024 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 ATP11BQ9Y2G3 1177 aa22.31■■□□□ 1.16
SHKBP1-222ENST00000600320 ALPK3Q96L96 1907 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 ARHGEF35A5YM69 484 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 CD4P01730 458 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 GNAT1P11488 350 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 SLC12A3P55017 1021 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 PADI6Q6TGC4 694 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 ANKRD33Q7Z3H0 272 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 SYT2Q8N9I0 419 aaPredicted RBP22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 DHX33Q9H6R0 707 aaKnown RBP22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 XPNPEP1Q9NQW7 623 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 LMBRD1Q9NUN5 540 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 STK17AQ9UEE5 414 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 TUBE1Q9UJT0 475 aa22.3■■□□□ 1.16
SHKBP1-222ENST00000600320 USO1O60763 962 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 SSBP05455 408 aaKnown RBP eCLIP22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 LIG1P18858 919 aa22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 TBC1D8BQ0IIM8 1120 aa22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 DRP2Q13474 957 aa22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 DHX8Q14562 1220 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 LRRC71Q8N4P6 559 aa22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 LINC01465Q8N7H1 131 aa22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 LARP4BQ92615 738 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 DHX38Q92620 1227 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 CCDC43Q96MW1 224 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 RUSC1Q9BVN2 902 aa22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 SERTAD1Q9UHV2 236 aa22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 PCDHA2Q9Y5H9 948 aa22.29■■□□□ 1.16
SHKBP1-222ENST00000600320 IGKV6-21A0A0C4DH24 114 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms