RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 IBSPP21815 317 aaPredicted RBP20.35■□□□□ 0.85
SSBP4-207ENST00000600244 TMEM62Q0P6H9 643 aa20.35■□□□□ 0.85
SSBP4-207ENST00000600244 AAMPQ13685 434 aa20.35■□□□□ 0.85
SSBP4-207ENST00000600244 TBC1D10CQ8IV04 446 aa20.35■□□□□ 0.85
SSBP4-207ENST00000600244 EXOC6Q8TAG9 804 aa20.35■□□□□ 0.85
SSBP4-207ENST00000600244 RGS18Q9NS28 235 aa20.35■□□□□ 0.85
SSBP4-207ENST00000600244 LOXHD1Q8IVV2 1947 aa20.35■□□□□ 0.85
SSBP4-207ENST00000600244 ZMYM6O95789 1325 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 GSTTP1A0A1W2PQM5 241 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 KRBA1A5PL33 1030 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 MARK3P27448 753 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 PDE4AP27815 886 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 TMEM266Q2M3C6 531 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 KCNT2Q6UVM3 1135 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 LRRC55Q6ZSA7 311 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 SLC24A5Q71RS6 500 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 ESR2Q92731 530 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 DCTPP1Q9H773 170 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 KAT14Q9H8E8 782 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 KCNK12Q9HB15 430 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 C1orf112Q9NSG2 853 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 WNT16Q9UBV4 365 aa20.34■□□□□ 0.85
SSBP4-207ENST00000600244 RRN3P2A6NIE6 340 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 M0QZ92 97 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 ZBTB5O15062 677 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 INSRRP14616 1297 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 IGBP1P78318 339 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 IRX6P78412 446 aaPredicted RBP20.33■□□□□ 0.85
SSBP4-207ENST00000600244 FAM189BP81408 668 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 TBC1D8BQ0IIM8 1120 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 SMC1AQ14683 1233 aaKnown RBP20.33■□□□□ 0.85
SSBP4-207ENST00000600244 STAG2Q8N3U4 1231 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 FEZF2Q8TBJ5 459 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 ACSF2Q96CM8 615 aaPredicted RBP20.33■□□□□ 0.85
SSBP4-207ENST00000600244 ADAM2Q99965 735 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 HELLSQ9NRZ9 838 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 DLGAP2Q9P1A6 1054 aa20.33■□□□□ 0.85
SSBP4-207ENST00000600244 FGFR1P11362 822 aa20.32■□□□□ 0.84
SSBP4-207ENST00000600244 KRT17Q04695 432 aa20.32■□□□□ 0.84
SSBP4-207ENST00000600244 NFX1Q12986 1120 aaKnown RBP20.32■□□□□ 0.84
SSBP4-207ENST00000600244 CCDC178Q5BJE1 867 aa20.32■□□□□ 0.84
SSBP4-207ENST00000600244 SEPT1Q8WYJ6 367 aa20.32■□□□□ 0.84
SSBP4-207ENST00000600244 DZANK1Q9NVP4 752 aa20.32■□□□□ 0.84
SSBP4-207ENST00000600244 PCDHA2Q9Y5H9 948 aa20.32■□□□□ 0.84
SSBP4-207ENST00000600244 NEDD4P46934 1319 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 DENND4AQ7Z401 1863 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 TRIM6-TRIM34B2RNG4 842 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 NARSO43776 548 aaKnown RBP20.31■□□□□ 0.84
SSBP4-207ENST00000600244 ADRB1P08588 477 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 PPM1AP35813 382 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 XRRA1Q6P2D8 792 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 OTOP3Q7RTS5 596 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 GIMAP8Q8ND71 665 aaPredicted RBP20.31■□□□□ 0.84
SSBP4-207ENST00000600244 SMARCAD1Q9H4L7 1026 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 ATP6V0A4Q9HBG4 840 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 TMEM161AQ9NX61 479 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 PCDHB15Q9Y5E8 787 aa20.31■□□□□ 0.84
SSBP4-207ENST00000600244 CACNA1IQ9P0X4 2223 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 STK25O00506 426 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 ATP9AO75110 1047 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 KRT76Q01546 638 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 COL9A2Q14055 689 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-207ENST00000600244 IQCA1Q86XH1 822 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 NME8Q8N427 588 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 GPR161Q8N6U8 529 aaKnown RBP20.3■□□□□ 0.84
SSBP4-207ENST00000600244 ENAHQ8N8S7 591 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-207ENST00000600244 OTUD7AQ8TE49 926 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-207ENST00000600244 GLG1Q92896 1179 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 ZNF558Q96NG5 402 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 CASD1Q96PB1 797 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 TMEM117Q9H0C3 514 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 RNF41Q9H4P4 317 aaPredicted RBP20.3■□□□□ 0.84
SSBP4-207ENST00000600244 ELAC1Q9H777 363 aaKnown RBP20.3■□□□□ 0.84
SSBP4-207ENST00000600244 SPG21Q9NZD8 308 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 IGSF9Q9P2J2 1179 aa20.3■□□□□ 0.84
SSBP4-207ENST00000600244 NOC2LQ9Y3T9 749 aaKnown RBP20.3■□□□□ 0.84
SSBP4-207ENST00000600244 DENND3A2RUS2 1198 aa20.29■□□□□ 0.84
SSBP4-207ENST00000600244 KLRF2D3W0D1 207 aa20.29■□□□□ 0.84
SSBP4-207ENST00000600244 KCNA2P16389 499 aa20.29■□□□□ 0.84
SSBP4-207ENST00000600244 PBX3P40426 434 aa20.29■□□□□ 0.84
SSBP4-207ENST00000600244 NT5C2P49902 561 aa20.29■□□□□ 0.84
SSBP4-207ENST00000600244 SLC35G1Q2M3R5 365 aa20.29■□□□□ 0.84
SSBP4-207ENST00000600244 C1orf210Q8IVY1 113 aa20.29■□□□□ 0.84
SSBP4-207ENST00000600244 SLC22A17Q8WUG5 538 aa20.29■□□□□ 0.84
SSBP4-207ENST00000600244 ZSCAN10Q96SZ4 725 aaPredicted RBP20.29■□□□□ 0.84
SSBP4-207ENST00000600244 RNF19AQ9NV58 838 aa20.29■□□□□ 0.84
SSBP4-207ENST00000600244 RALYQ9UKM9 306 aaKnown RBP20.29■□□□□ 0.84
SSBP4-207ENST00000600244 SMIM35A0A1B0GVV1 85 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 CFHP08603 1231 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 EPCAMP16422 314 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 VARS2Q5ST30 1063 aaKnown RBP20.28■□□□□ 0.84
SSBP4-207ENST00000600244 PCNX4Q63HM2 1172 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 GPR149Q86SP6 731 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 MAML2Q8IZL2 1156 aaPredicted RBP20.28■□□□□ 0.84
SSBP4-207ENST00000600244 SLC39A11Q8N1S5 342 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 TMEM40Q8WWA1 233 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 PCYT2Q99447 389 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 TBC1D17Q9HA65 648 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 CDHR5Q9HBB8 845 aa20.28■□□□□ 0.84
SSBP4-207ENST00000600244 DCDC2BA2VCK2 349 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms