RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	KDM3A	Q9Y4C1	1321 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	COL1A2	P08123	1366 aa		24.54	■■□□□ 1.52
LTBP4-227	ENST00000600026	LOXHD1	Q8IVV2	1947 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	CLTB	P09497	229 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	SPATA31C1	P0DKV0	1188 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	IGBP1	P78318	339 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	FAAP100	Q0VG06	881 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	PTGIS	Q16647	500 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	XKR3	Q5GH77	459 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	TPH2	Q8IWU9	490 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	C4orf19	Q8IY42	314 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	TRAPPC12	Q8WVT3	735 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	CTAGE1	Q96RT6	745 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	PYM1	Q9BRP8	204 aa	Known RBP	24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	POLR3C	Q9BUI4	534 aa	Predicted RBP	24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	TUFT1	Q9NNX1	390 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	PDLIM7	Q9NR12	457 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	SEPT9	Q9UHD8	586 aa	Predicted RBP	24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	DNAH12	Q6ZR08	3092 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026	LTBP2	Q14767	1821 aa		24.53	■■□□□ 1.52
LTBP4-227	ENST00000600026		A0A1B0GVL5	298 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	GNAT1	P11488	350 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	PFKFB1	P16118	471 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	RPA1	P27694	616 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	ADAM17	P78536	824 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	NFKBIB	Q15653	356 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	ZRSR1	Q15695	479 aa	Known RBP	24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	ZNF484	Q5JVG2	852 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	USP49	Q70CQ1	688 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	CATSPER3	Q86XQ3	398 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	NRBP2	Q9NSY0	501 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	NOD1	Q9Y239	953 aa		24.52	■■□□□ 1.52
LTBP4-227	ENST00000600026	TANC1	Q9C0D5	1861 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	FAM237A	A0A1B0GTK4	181 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	TMEM150B	A6NC51	233 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	RRN3P2	A6NIE6	340 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	ZBTB42	B2RXF5	422 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	TREH	O43280	583 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	LYPLA2	O95372	231 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	MUT	P22033	750 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	MMTAG2	Q9BU76	263 aa	Known RBP	24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	NT5C3A	Q9H0P0	336 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	PRDM5	Q9NQX1	630 aa	Predicted RBP	24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	KCNH3	Q9ULD8	1083 aa		24.51	■■□□□ 1.51
LTBP4-227	ENST00000600026	MBD3	O95983	291 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	CYP2C9	P11712	490 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	MARCH8	Q5T0T0	291 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	PLA2G4F	Q68DD2	849 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	POTEG	Q6S5H5	508 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	ANO5	Q75V66	913 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	SH3RF1	Q7Z6J0	888 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	ZBTB10	Q96DT7	871 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	NIFK	Q9BYG3	293 aa	Known RBP	24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	GOLPH3L	Q9H4A5	285 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	TUBE1	Q9UJT0	475 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	TBX21	Q9UL17	535 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	COLQ	Q9Y215	455 aa	Predicted RBP	24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	HPSE	Q9Y251	543 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	EVPL	Q92817	2033 aa		24.5	■■□□□ 1.51
LTBP4-227	ENST00000600026	MBLAC1	A4D2B0	266 aa	Predicted RBP	24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	YWHAB	P31946	246 aa	Known RBP	24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	SYK	P43405	635 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	NDUFA8	P51970	172 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	FAM160A1	Q05DH4	1040 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	KARS	Q15046	597 aa	Known RBP	24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	ECM1	Q16610	540 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	MTERF2	Q49AM1	385 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	RRAGB	Q5VZM2	374 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	KCTD17	Q8N5Z5	321 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	SH2D3A	Q9BRG2	576 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	PANK2	Q9BZ23	570 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	TMEM39A	Q9NV64	488 aa		24.49	■■□□□ 1.51
LTBP4-227	ENST00000600026	PTK7	Q13308	1070 aa		24.48	■■□□□ 1.51
LTBP4-227	ENST00000600026	TARBP2	Q15633	366 aa	Known RBP	24.48	■■□□□ 1.51
LTBP4-227	ENST00000600026	HYI	Q5T013	277 aa		24.48	■■□□□ 1.51
LTBP4-227	ENST00000600026	SERINC5	Q86VE9	423 aa		24.48	■■□□□ 1.51
LTBP4-227	ENST00000600026	PDILT	Q8N807	584 aa		24.48	■■□□□ 1.51
LTBP4-227	ENST00000600026	DHX38	Q92620	1227 aa	Known RBP	24.48	■■□□□ 1.51
LTBP4-227	ENST00000600026	WNT8B	Q93098	351 aa		24.48	■■□□□ 1.51
LTBP4-227	ENST00000600026	TRIM43B	A6NCK2	446 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	ZBTB39	O15060	712 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	KIAA0355	O15063	1070 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	POLR2D	O15514	142 aa	Known RBP	24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	C22orf31	O95567	290 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	STAT6	P42226	847 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	GRB10	Q13322	594 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	MTHFD1L	Q6UB35	978 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	RUFY4	Q6ZNE9	571 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	IQUB	Q8NA54	791 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	TRIM43	Q96BQ3	446 aa	Predicted RBP	24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	CEP89	Q96ST8	783 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	USP25	Q9UHP3	1055 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	KIAA1024	Q9UPX6	916 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026	SI	P14410	1827 aa		24.47	■■□□□ 1.51
LTBP4-227	ENST00000600026		A0A087WWV3	80 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	LIG1	P18858	919 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	PLCG1	P19174	1290 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	KLRC1	P26715	233 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	NPEPPS	P55786	919 aa		24.46	■■□□□ 1.51
LTBP4-227	ENST00000600026	TMEM119	Q4V9L6	283 aa		24.46	■■□□□ 1.51

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms