RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 BBXQ8WY36 941 aaPredicted RBP13.56□□□□□ -0.24
ZNF548-209ENST00000598895 MTIF3Q9H2K0 278 aaKnown RBP13.56□□□□□ -0.24
ZNF548-209ENST00000598895 TMEM60Q9H2L4 133 aa13.56□□□□□ -0.24
ZNF548-209ENST00000598895 SEPT9Q9UHD8 586 aaPredicted RBP13.56□□□□□ -0.24
ZNF548-209ENST00000598895 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.56□□□□□ -0.24
ZNF548-209ENST00000598895 CDY2AQ9Y6F7 541 aa13.56□□□□□ -0.24
ZNF548-209ENST00000598895 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
ZNF548-209ENST00000598895 PTPRSQ13332 1948 aa13.56□□□□□ -0.24
ZNF548-209ENST00000598895 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.55□□□□□ -0.24
ZNF548-209ENST00000598895 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.55□□□□□ -0.24
ZNF548-209ENST00000598895 ZBTB42B2RXF5 422 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 TBX3O15119 743 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 CHRNA1P02708 482 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 GHRP10912 638 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 RABGGTBP53611 331 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 PPP2R5CQ13362 524 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 MTERF2Q49AM1 385 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 TTC38Q5R3I4 469 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 CNKSR3Q6P9H4 555 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 RSPH3Q86UC2 560 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 SLFN12Q8IYM2 578 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 METTL13Q8N6R0 699 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 DBF4BQ8NFT6 615 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 RDM1Q8NG50 284 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 SYAP1Q96A49 352 aaPredicted RBP13.55□□□□□ -0.24
ZNF548-209ENST00000598895 TTC12Q9H892 705 aaPredicted RBP13.55□□□□□ -0.24
ZNF548-209ENST00000598895 NRBP2Q9NSY0 501 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 NOL7Q9UMY1 257 aaKnown RBP13.55□□□□□ -0.24
ZNF548-209ENST00000598895 PCDHA2Q9Y5H9 948 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 COL1A2P08123 1366 aa13.55□□□□□ -0.24
ZNF548-209ENST00000598895 LOXHD1Q8IVV2 1947 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 EVPLQ92817 2033 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 CAND2O75155 1236 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 PARNO95453 639 aaKnown RBP13.54□□□□□ -0.24
ZNF548-209ENST00000598895 C22orf31O95567 290 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 CXCL10P02778 98 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 TPM2P07951 284 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 MRPS6P82932 125 aaKnown RBP13.54□□□□□ -0.24
ZNF548-209ENST00000598895 SMAD3P84022 425 aaKnown RBP13.54□□□□□ -0.24
ZNF548-209ENST00000598895 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 MGAT3Q09327 533 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 CUL4AQ13619 759 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 CTTNQ14247 550 aaKnown RBP13.54□□□□□ -0.24
ZNF548-209ENST00000598895 ZSCAN23Q3MJ62 389 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
ZNF548-209ENST00000598895 PLA2G4FQ68DD2 849 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 ZSCAN30Q86W11 494 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 LRRC71Q8N4P6 559 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 DYDC2Q96IM9 177 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 FAM167AQ96KS9 214 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 WRAP73Q9P2S5 460 aaPredicted RBP13.54□□□□□ -0.24
ZNF548-209ENST00000598895 PCDHA12Q9UN75 941 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 GINS2Q9Y248 185 aa13.54□□□□□ -0.24
ZNF548-209ENST00000598895 RANBP2P49792 3224 aaKnown RBP13.54□□□□□ -0.24
ZNF548-209ENST00000598895 SMIM35A0A1B0GVV1 85 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 POTEMA6NI47 508 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 M0QZ92 97 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 MYOGP15173 224 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
ZNF548-209ENST00000598895 NCLP19338 710 aaKnown RBP13.53□□□□□ -0.24
ZNF548-209ENST00000598895 DNAJB2P25686 324 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 MSNP26038 577 aaKnown RBP13.53□□□□□ -0.24
ZNF548-209ENST00000598895 U2AF2P26368 475 aaKnown RBP eCLIP13.53□□□□□ -0.24
ZNF548-209ENST00000598895 KCNJ6P48051 423 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 CLCN3P51790 818 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 WDR5P61964 334 aaKnown RBP13.53□□□□□ -0.24
ZNF548-209ENST00000598895 PSMC5P62195 406 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 DEFB103AP81534 67 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 IKBKEQ14164 716 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 EPHA7Q15375 998 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 FAM26DQ5JW98 314 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 FAM117BQ6P1L5 589 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 DEFB123Q8N688 67 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 ZNF668Q96K58 619 aaPredicted RBP13.53□□□□□ -0.24
ZNF548-209ENST00000598895 MTMR9Q96QG7 549 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 PBX4Q9BYU1 374 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 SUGCTQ9HAC7 445 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
ZNF548-209ENST00000598895 CEP131Q9UPN4 1083 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 PCDHB6Q9Y5E3 794 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
ZNF548-209ENST00000598895 VPS37CA5D8V6 355 aaPredicted RBP13.52□□□□□ -0.25
ZNF548-209ENST00000598895 BAIAP3O94812 1187 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 STBD1O95210 358 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 VTNP04004 478 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 OR52Z1P0C646 297 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 TECP42680 631 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 QARSP47897 775 aaKnown RBP13.52□□□□□ -0.25
ZNF548-209ENST00000598895 TOB1P50616 345 aaPredicted RBP13.52□□□□□ -0.25
ZNF548-209ENST00000598895 LPIN1Q14693 890 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 PLEKHG4Q58EX7 1191 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 XKR3Q5GH77 459 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 ZNF697Q5TEC3 545 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 IER5Q5VY09 327 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 EFCAB12Q6NXP0 572 aa13.52□□□□□ -0.25
ZNF548-209ENST00000598895 CAVIN1Q6NZI2 390 aaKnown RBP13.52□□□□□ -0.25
ZNF548-209ENST00000598895 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.52□□□□□ -0.25
ZNF548-209ENST00000598895 RPAINQ86UA6 219 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms