RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 ABHD15Q6UXT9 468 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 PLPPR4Q7Z2D5 763 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 RPAINQ86UA6 219 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 ARNTL2Q8WYA1 636 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 COL25A1Q9BXS0 654 aaPredicted RBP17.39■□□□□ 0.37
XRCC1-206ENST00000597811 FOXP1Q9H334 677 aaPredicted RBP17.39■□□□□ 0.37
XRCC1-206ENST00000597811 UNC45AQ9H3U1 944 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 DISC1Q9NRI5 854 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 GABBR1Q9UBS5 961 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 NOL7Q9UMY1 257 aaKnown RBP17.39■□□□□ 0.37
XRCC1-206ENST00000597811 BRWD1Q9NSI6 2320 aa17.39■□□□□ 0.37
XRCC1-206ENST00000597811 NCOR1O75376 2440 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 IGKV6D-21A0A0A0MT36 114 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 POTEB3A0JP26 581 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 SFNP31947 248 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 MCM7P33993 719 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 JAK3P52333 1124 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 MGAT3Q09327 533 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 LARP1BQ659C4 914 aaKnown RBP17.38■□□□□ 0.37
XRCC1-206ENST00000597811 POTEBQ6S5H4 581 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 CCDC60Q8IWA6 550 aaPredicted RBP17.38■□□□□ 0.37
XRCC1-206ENST00000597811 HSCBQ8IWL3 235 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 MYOCDQ8IZQ8 938 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 DNAJB3Q8WWF6 145 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 SEPT8Q92599 483 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 FAM20AQ96MK3 541 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 MBOAT7Q96N66 472 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 RAD9AQ99638 391 aa17.38■□□□□ 0.37
XRCC1-206ENST00000597811 RRN3P2A6NIE6 340 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 K7ELQ4 463 aaPredicted RBP17.37■□□□□ 0.37
XRCC1-206ENST00000597811 NEMFO60524 1076 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 PSMD10O75832 226 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 AMHP03971 560 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
XRCC1-206ENST00000597811 SLC26A2P50443 739 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 CALCRLQ16602 461 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 NOSTRINQ8IVI9 506 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 SLFN12Q8IYM2 578 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 ETNPPLQ8TBG4 499 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 TRAPPC12Q8WVT3 735 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 IFIH1Q9BYX4 1025 aaKnown RBP17.37■□□□□ 0.37
XRCC1-206ENST00000597811 TTC3P53804 2025 aa17.37■□□□□ 0.37
XRCC1-206ENST00000597811 RALGAPA2Q2PPJ7 1873 aa17.36■□□□□ 0.37
XRCC1-206ENST00000597811 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.36■□□□□ 0.37
XRCC1-206ENST00000597811 GHRP10912 638 aa17.36■□□□□ 0.37
XRCC1-206ENST00000597811 RSPH3Q86UC2 560 aa17.36■□□□□ 0.37
XRCC1-206ENST00000597811 MICALL1Q8N3F8 863 aa17.36■□□□□ 0.37
XRCC1-206ENST00000597811 FAM49AQ9H0Q0 323 aaPredicted RBP17.36■□□□□ 0.37
XRCC1-206ENST00000597811 MTCH2Q9Y6C9 303 aa17.36■□□□□ 0.37
XRCC1-206ENST00000597811 LINC01553A4QN01 128 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 TBX3O15119 743 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 HBP1O60381 514 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 POU3F3P20264 500 aaPredicted RBP17.35■□□□□ 0.37
XRCC1-206ENST00000597811 TXKP42681 527 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 HTRA4P83105 476 aaPredicted RBP17.35■□□□□ 0.37
XRCC1-206ENST00000597811 CUL4AQ13619 759 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 LPIN1Q14693 890 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 ZNF174Q15697 407 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 NCAPH2Q6IBW4 605 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 APBB2Q92870 758 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 KCNMB3Q9NPA1 279 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 CDY2AQ9Y6F7 541 aa17.35■□□□□ 0.37
XRCC1-206ENST00000597811 VPS37CA5D8V6 355 aaPredicted RBP17.34■□□□□ 0.37
XRCC1-206ENST00000597811 LPXNO60711 386 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 MRPS6P82932 125 aaKnown RBP17.34■□□□□ 0.37
XRCC1-206ENST00000597811 TMEM62Q0P6H9 643 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 GRB10Q13322 594 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 COL4A6Q14031 1691 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 FBXO47Q5MNV8 452 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 TTC38Q5R3I4 469 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 RDM1Q8NG50 284 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 ATP8B4Q8TF62 1192 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 TOP1MTQ969P6 601 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 NRBP2Q9NSY0 501 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 MTUS1Q9ULD2 1270 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 PCDHA12Q9UN75 941 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 INSL6Q9Y581 213 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 PCDHA2Q9Y5H9 948 aa17.34■□□□□ 0.37
XRCC1-206ENST00000597811 TCF20Q9UGU0 1960 aaKnown RBP17.33■□□□□ 0.37
XRCC1-206ENST00000597811 ATG2AQ2TAZ0 1938 aa17.33■□□□□ 0.37
XRCC1-206ENST00000597811 GTPBP6O43824 516 aaPredicted RBP17.33■□□□□ 0.36
XRCC1-206ENST00000597811 UPP2O95045 317 aa17.33■□□□□ 0.36
XRCC1-206ENST00000597811 ATP4AP20648 1035 aa17.33■□□□□ 0.36
XRCC1-206ENST00000597811 PDCP20941 246 aa17.33■□□□□ 0.36
XRCC1-206ENST00000597811 MTHFD1LQ6UB35 978 aa17.33■□□□□ 0.36
XRCC1-206ENST00000597811 BANK1Q8NDB2 785 aa17.33■□□□□ 0.36
XRCC1-206ENST00000597811 SP7Q8TDD2 431 aaPredicted RBP17.33■□□□□ 0.36
XRCC1-206ENST00000597811 GDPD5Q8WTR4 605 aa17.33■□□□□ 0.36
XRCC1-206ENST00000597811 BBXQ8WY36 941 aaPredicted RBP17.33■□□□□ 0.36
XRCC1-206ENST00000597811 HAS1Q92839 578 aa17.33■□□□□ 0.36
XRCC1-206ENST00000597811 FAM167AQ96KS9 214 aa17.33■□□□□ 0.36
XRCC1-206ENST00000597811 TGS1Q96RS0 853 aaKnown RBP17.33■□□□□ 0.36
XRCC1-206ENST00000597811 MAFBQ9Y5Q3 323 aaPredicted RBP17.33■□□□□ 0.36
XRCC1-206ENST00000597811 BDP1A6H8Y1 2624 aa17.33■□□□□ 0.36
XRCC1-206ENST00000597811 WNT7AO00755 349 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 OATP04181 439 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 U2AF2P26368 475 aaKnown RBP eCLIP17.32■□□□□ 0.36
XRCC1-206ENST00000597811 ERVK-21P61565 698 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms