RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 MFSD1Q9H3U5 465 aa11.62□□□□□ -0.55
TRIM28-210ENST00000597618 RGS18Q9NS28 235 aa11.62□□□□□ -0.55
TRIM28-210ENST00000597618 TYW1Q9NV66 732 aaKnown RBP11.62□□□□□ -0.55
TRIM28-210ENST00000597618 PKD2L1Q9P0L9 805 aa11.62□□□□□ -0.55
TRIM28-210ENST00000597618 SEC63Q9UGP8 760 aaKnown RBP11.62□□□□□ -0.55
TRIM28-210ENST00000597618 DNAH14Q0VDD8 3507 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 C2CD4DB7Z1M9 353 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 MAFGO15525 162 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 MGEA5O60502 916 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 RPS6KA5O75582 802 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 PPM1AP35813 382 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 APOBRQ0VD83 1088 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 WTAPQ15007 396 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 SART3Q15020 963 aaKnown RBP11.61□□□□□ -0.55
TRIM28-210ENST00000597618 PLCB4Q15147 1175 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 FAM102BQ5T8I3 360 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 CATIPQ7Z7H3 387 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 ADSSL1Q8N142 457 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 TRAPPC12Q8WVT3 735 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 PCYT2Q99447 389 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 ADAM2Q99965 735 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 SPZ1Q9BXG8 430 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 ADAM7Q9H2U9 754 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 ATP6V0A4Q9HBG4 840 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 ERVK-5Q9HDB9 667 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 HCSTQ9UBK5 93 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 GINS2Q9Y248 185 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 UBIAD1Q9Y5Z9 338 aa11.61□□□□□ -0.55
TRIM28-210ENST00000597618 EP300Q09472 2414 aaPredicted RBP11.61□□□□□ -0.55
TRIM28-210ENST00000597618 BAZ2BQ9UIF8 2168 aaKnown RBP11.61□□□□□ -0.55
TRIM28-210ENST00000597618 HIDE1A8MVS5 230 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 C9IYK1 514 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 GPR182O15218 404 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 PDE4AP27815 886 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 MTHFRP42898 656 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 SLC26A2P50443 739 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 CLCN5P51795 746 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 KRT17Q04695 432 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 MTHFD1LQ6UB35 978 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 PLPPR4Q7Z2D5 763 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 TDRD5Q8NAT2 981 aaKnown RBP11.6□□□□□ -0.55
TRIM28-210ENST00000597618 OSBPL3Q9H4L5 887 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 POMKQ9H5K3 350 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 CWH43Q9H720 699 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 SENP2Q9HC62 589 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 JADE2Q9NQC1 790 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 SLC9A2Q9UBY0 812 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 NOC2LQ9Y3T9 749 aaKnown RBP11.6□□□□□ -0.55
TRIM28-210ENST00000597618 EPG5Q9HCE0 2579 aa11.6□□□□□ -0.55
TRIM28-210ENST00000597618 NCOR2Q9Y618 2525 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 FRYLO94915 3013 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 SPDYE3A6NKU9 549 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 HOXA2O43364 376 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 FGFR1P11362 822 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 KIF5BP33176 963 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 STAT5BP51692 787 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 SMC1AQ14683 1233 aaKnown RBP11.59□□□□□ -0.55
TRIM28-210ENST00000597618 KCNT2Q6UVM3 1135 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 TMC7Q7Z402 723 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 RALYLQ86SE5 291 aaKnown RBP11.59□□□□□ -0.55
TRIM28-210ENST00000597618 ZDHHC14Q8IZN3 488 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 LRRC43Q8N309 656 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 CTCFLQ8NI51 663 aaPredicted RBP11.59□□□□□ -0.55
TRIM28-210ENST00000597618 ZNF558Q96NG5 402 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 SDF4Q9BRK5 362 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 TMEM117Q9H0C3 514 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 SMOC2Q9H3U7 446 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 ELAC1Q9H777 363 aaKnown RBP11.59□□□□□ -0.55
TRIM28-210ENST00000597618 CDH22Q9UJ99 828 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 ST3GAL5Q9UNP4 418 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 HCFC2Q9Y5Z7 792 aa11.59□□□□□ -0.55
TRIM28-210ENST00000597618 ASGR2P07307 311 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 SMARCA1P28370 1054 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 ACTR2P61160 394 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 FAM189BP81408 668 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 PLEKHM2Q8IWE5 1019 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 ABI1Q8IZP0 508 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 TMEM40Q8WWA1 233 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 MAP3K14Q99558 947 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 LZTS2Q9BRK4 669 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 KCNH7Q9NS40 1196 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 DZANK1Q9NVP4 752 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 SPG21Q9NZD8 308 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 USTQ9Y2C2 406 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
TRIM28-210ENST00000597618 NFASCO94856 1347 aa11.58□□□□□ -0.56
TRIM28-210ENST00000597618 FNDC1Q4ZHG4 1894 aaPredicted RBP11.57□□□□□ -0.56
TRIM28-210ENST00000597618 COL1A2P08123 1366 aa11.57□□□□□ -0.56
TRIM28-210ENST00000597618 C2orf71A6NGG8 1288 aa11.57□□□□□ -0.56
TRIM28-210ENST00000597618 DDAH1O94760 285 aa11.57□□□□□ -0.56
TRIM28-210ENST00000597618 KLRC1P26715 233 aa11.57□□□□□ -0.56
TRIM28-210ENST00000597618 CRYBB1P53674 252 aaPredicted RBP11.57□□□□□ -0.56
TRIM28-210ENST00000597618 BMS1Q14692 1282 aaKnown RBP11.57□□□□□ -0.56
TRIM28-210ENST00000597618 CWF19L1Q69YN2 538 aaKnown RBP11.57□□□□□ -0.56
TRIM28-210ENST00000597618 KIAA1841Q6NSI8 718 aa11.57□□□□□ -0.56
TRIM28-210ENST00000597618 CCDC105Q8IYK2 499 aa11.57□□□□□ -0.56
TRIM28-210ENST00000597618 KIAA0319LQ8IZA0 1049 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms