RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 DNAJB3Q8WWF6 145 aa18.11■□□□□ 0.49
USHBP1-205ENST00000595993 PCYT2Q99447 389 aa18.11■□□□□ 0.49
USHBP1-205ENST00000595993 PLVAPQ9BX97 442 aa18.11■□□□□ 0.49
USHBP1-205ENST00000595993 GLT8D2Q9H1C3 349 aa18.11■□□□□ 0.49
USHBP1-205ENST00000595993 SMARCAD1Q9H4L7 1026 aa18.11■□□□□ 0.49
USHBP1-205ENST00000595993 AGO3Q9H9G7 860 aaKnown RBP18.11■□□□□ 0.49
USHBP1-205ENST00000595993 GJB4Q9NTQ9 266 aa18.11■□□□□ 0.49
USHBP1-205ENST00000595993 CLDND1Q9NY35 253 aa18.11■□□□□ 0.49
USHBP1-205ENST00000595993 CDY2AQ9Y6F7 541 aa18.11■□□□□ 0.49
USHBP1-205ENST00000595993 FOSP01100 380 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-205ENST00000595993 MRPS6P82932 125 aaKnown RBP18.1■□□□□ 0.49
USHBP1-205ENST00000595993 DLX2Q07687 328 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-205ENST00000595993 REXO1Q8N1G1 1221 aaKnown RBP18.1■□□□□ 0.49
USHBP1-205ENST00000595993 P2RX5Q93086 422 aa18.1■□□□□ 0.49
USHBP1-205ENST00000595993 JADE2Q9NQC1 790 aa18.1■□□□□ 0.49
USHBP1-205ENST00000595993 ORC3Q9UBD5 711 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-205ENST00000595993 RRN3P2A6NIE6 340 aa18.09■□□□□ 0.49
USHBP1-205ENST00000595993 MARK3P27448 753 aa18.09■□□□□ 0.49
USHBP1-205ENST00000595993 GNA11P29992 359 aa18.09■□□□□ 0.49
USHBP1-205ENST00000595993 SREBF1P36956 1147 aa18.09■□□□□ 0.49
USHBP1-205ENST00000595993 NLRP5P59047 1200 aa18.09■□□□□ 0.49
USHBP1-205ENST00000595993 BTG3Q14201 252 aaPredicted RBP18.09■□□□□ 0.49
USHBP1-205ENST00000595993 RTN4RL1Q86UN2 441 aaPredicted RBP18.09■□□□□ 0.49
USHBP1-205ENST00000595993 ZSCAN31Q96LW9 406 aaPredicted RBP18.09■□□□□ 0.49
USHBP1-205ENST00000595993 KCNJ14Q9UNX9 436 aa18.09■□□□□ 0.49
USHBP1-205ENST00000595993 MBTPS2O43462 519 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 TBX10O75333 385 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 INSRRP14616 1297 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 IRS1P35568 1242 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 NAALADL2Q58DX5 795 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
USHBP1-205ENST00000595993 CRYGNQ8WXF5 182 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 GLG1Q92896 1179 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 PHF20Q9BVI0 1012 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 FTHL17Q9BXU8 183 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 PCDHA4Q9UN74 947 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 PLAGL2Q9UPG8 496 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 LOXHD1Q8IVV2 1947 aa18.08■□□□□ 0.48
USHBP1-205ENST00000595993 ZNF318Q5VUA4 2279 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 NFASCO94856 1347 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 IGSF9BQ9UPX0 1349 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 KDM3AQ9Y4C1 1321 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 M0R2N6 131 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 ST18O60284 1047 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 CD52P31358 61 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 ADAM15Q13444 863 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 IER5Q5VY09 327 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 FAM43BQ6ZT52 329 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-205ENST00000595993 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 DAGLBQ8NCG7 672 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 CYP2W1Q8TAV3 490 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 ZBTB10Q96DT7 871 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 KCNH6Q9H252 994 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 JPH1Q9HDC5 661 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-205ENST00000595993 SH2B1Q9NRF2 756 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-205ENST00000595993 KCNH7Q9NS40 1196 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 PCDHA2Q9Y5H9 948 aa18.07■□□□□ 0.48
USHBP1-205ENST00000595993 MRPL42Q9Y6G3 142 aaKnown RBP18.07■□□□□ 0.48
USHBP1-205ENST00000595993 EDIL3O43854 480 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 DNAJB1P25685 340 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 GTF2F1P35269 517 aaKnown RBP eCLIP18.06■□□□□ 0.48
USHBP1-205ENST00000595993 SMAD4Q13485 552 aaKnown RBP18.06■□□□□ 0.48
USHBP1-205ENST00000595993 EP400NLQ6ZTU2 488 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 PLPPR4Q7Z2D5 763 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 BLIDQ8IZY5 108 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 FAM177A1Q8N128 213 aaPredicted RBP18.06■□□□□ 0.48
USHBP1-205ENST00000595993 BICD2Q8TD16 824 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 MSLNLQ96KJ4 702 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 MXRA8Q9BRK3 442 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 SLC9A2Q9UBY0 812 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 TRPV2Q9Y5S1 764 aa18.06■□□□□ 0.48
USHBP1-205ENST00000595993 LINC01565O15544 149 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 ATG7O95352 703 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 EYA4O95677 639 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 FOSBP53539 338 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 PLCB4Q15147 1175 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 HERC4Q5GLZ8 1057 aaPredicted RBP18.05■□□□□ 0.48
USHBP1-205ENST00000595993 MCTP2Q6DN12 878 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 SPPL3Q8TCT6 385 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 WASF1Q92558 559 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 POP1Q99575 1024 aaKnown RBP18.05■□□□□ 0.48
USHBP1-205ENST00000595993 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
USHBP1-205ENST00000595993 ALG13Q9NP73 1137 aaKnown RBP18.05■□□□□ 0.48
USHBP1-205ENST00000595993 PKD2L1Q9P0L9 805 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 PADI3Q9ULW8 664 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 PLXNA4Q9HCM2 1894 aa18.05■□□□□ 0.48
USHBP1-205ENST00000595993 IGLV3-22A0A075B6J6 115 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 IGKV6D-21A0A0A0MT36 114 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 SMIM35A0A1B0GVV1 85 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 FAM86B1E9PN63 330 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 ITGB1P05556 798 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 CYP3A4P08684 503 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 FAM86B2P0C5J1 330 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 ACTR2P61160 394 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 IGBP1P78318 339 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 ITGB3BPQ13352 177 aaPredicted RBP18.04■□□□□ 0.48
USHBP1-205ENST00000595993 CSPP1Q1MSJ5 1256 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 OXER1Q8TDS5 423 aa18.04■□□□□ 0.48
USHBP1-205ENST00000595993 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
USHBP1-205ENST00000595993 TMX3Q96JJ7 454 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms