RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 VAV3Q9UKW4 847 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 PPP2R3BQ9Y5P8 575 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 PARP14Q460N5 1801 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 SOWAHDA6NJG2 315 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
PNKP-204ENST00000594661 MYBL2P10244 700 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 EZRP15311 586 aaKnown RBP16.85■□□□□ 0.29
PNKP-204ENST00000594661 FXR1P51114 621 aaKnown RBP eCLIP16.85■□□□□ 0.29
PNKP-204ENST00000594661 HSD17B4P51659 736 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 UBXN1Q04323 297 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 MTF1Q14872 753 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 TTI2Q6NXR4 508 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 SLC30A10Q6XR72 485 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 UNC13DQ70J99 1090 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 AS3MTQ9HBK9 375 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 COL20A1Q9P218 1284 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 MAGEC2Q9UBF1 373 aaPredicted RBP16.85■□□□□ 0.29
PNKP-204ENST00000594661 ZHX2Q9Y6X8 837 aa16.85■□□□□ 0.29
PNKP-204ENST00000594661 POTEFA5A3E0 1075 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 GOLGA8KD6RF30 607 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 NDUFAB1O14561 156 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 POTEIP0CG38 1075 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 ALAS1P13196 640 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 EEF1GP26641 437 aaKnown RBP16.84■□□□□ 0.29
PNKP-204ENST00000594661 AMPD2Q01433 879 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 PRKG1Q13976 671 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 SNCBQ16143 134 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 CDCA2Q69YH5 1023 aaPredicted RBP16.84■□□□□ 0.29
PNKP-204ENST00000594661 CNNM4Q6P4Q7 775 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 POTEGQ6S5H5 508 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 POTEEQ6S8J3 1075 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 SLC35F6Q8N357 371 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 P2RX5Q93086 422 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 WNK4Q96J92 1243 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 HOMER2Q9NSB8 354 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 PVALEFA0A1B0GWK0 134 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 PES1O00541 588 aaKnown RBP16.84■□□□□ 0.29
PNKP-204ENST00000594661 CCNE1P24864 410 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 HMGCS2P54868 508 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 HAUS3Q68CZ6 603 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 CATSPER3Q86XQ3 398 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 CSGALNACT2Q8N6G5 542 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 EHMT1Q9H9B1 1298 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 SLC40A1Q9NP59 571 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 SLC39A2Q9NP94 309 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 MYO1AQ9UBC5 1043 aa16.84■□□□□ 0.29
PNKP-204ENST00000594661 BICDL2A1A5D9 508 aa16.83■□□□□ 0.28
PNKP-204ENST00000594661 EME2A4GXA9 379 aaPredicted RBP16.83■□□□□ 0.28
PNKP-204ENST00000594661 SLC26A4O43511 780 aa16.83■□□□□ 0.28
PNKP-204ENST00000594661 TFRCP02786 760 aaKnown RBP16.83■□□□□ 0.28
PNKP-204ENST00000594661 SSBP05455 408 aaKnown RBP eCLIP16.83■□□□□ 0.28
PNKP-204ENST00000594661 SPATA31C1P0DKV0 1188 aa16.83■□□□□ 0.28
PNKP-204ENST00000594661 IDEP14735 1019 aa16.83■□□□□ 0.28
PNKP-204ENST00000594661 PPP1R2P41236 205 aa16.83■□□□□ 0.28
PNKP-204ENST00000594661 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
PNKP-204ENST00000594661 DNAJC19Q96DA6 116 aa16.83■□□□□ 0.28
PNKP-204ENST00000594661 ATG4CQ96DT6 458 aa16.83■□□□□ 0.28
PNKP-204ENST00000594661 CCDC51Q96ER9 411 aa16.83■□□□□ 0.28
PNKP-204ENST00000594661 DUSP9Q99956 384 aaKnown RBP16.83■□□□□ 0.28
PNKP-204ENST00000594661 BATF3Q9NR55 127 aa16.83■□□□□ 0.28
PNKP-204ENST00000594661 PITPNM2Q9BZ72 1349 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 GOLGA6BA6NDN3 693 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 EML1O00423 815 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 PLA2G4BP0C869 781 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 TRIM14Q14142 442 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 CEP55Q53EZ4 464 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 ANKRD40Q6AI12 368 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 RAD9BQ6WBX8 426 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 CCDC13Q8IYE1 715 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 LRRC27Q9C0I9 530 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 ADARB2Q9NS39 739 aaKnown RBP16.82■□□□□ 0.28
PNKP-204ENST00000594661 RLFQ13129 1914 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 LGALS16A8MUM7 142 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 MEIS1O00470 390 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 IPO7O95373 1038 aaKnown RBP16.82■□□□□ 0.28
PNKP-204ENST00000594661 RPA1P27694 616 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 CDR1P51861 262 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 NAP1L1P55209 391 aaKnown RBP16.82■□□□□ 0.28
PNKP-204ENST00000594661 EHHADHQ08426 723 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 COBLL1Q53SF7 1204 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 FAM228AQ86W67 206 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.82■□□□□ 0.283e-6■■■■■ 38.3
PNKP-204ENST00000594661 ERMNQ8TAM6 284 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 MICAL1Q8TDZ2 1067 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 EEF2KMTQ96G04 330 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 MYO6Q9UM54 1294 aa16.82■□□□□ 0.28
PNKP-204ENST00000594661 RBBP6Q7Z6E9 1792 aaKnown RBP16.81■□□□□ 0.28
PNKP-204ENST00000594661 RPTORQ8N122 1335 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 VWA5AO00534 786 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 SNUPNO95149 360 aaKnown RBP16.81■□□□□ 0.28
PNKP-204ENST00000594661 EPB41P11171 864 aaKnown RBP16.81■□□□□ 0.28
PNKP-204ENST00000594661 GCKP35557 465 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 PSMC6P62333 389 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 GHRHRQ02643 423 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 SUPT20HL1Q3ZLR7 823 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 NOL9Q5SY16 702 aaKnown RBP16.81■□□□□ 0.28
PNKP-204ENST00000594661 PARP9Q8IXQ6 854 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 MB21D1Q8N884 522 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 IL31RAQ8NI17 732 aa16.81■□□□□ 0.28
PNKP-204ENST00000594661 SLC5A5Q92911 643 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms