RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 YEATS4O95619 227 aa16.7■□□□□ 0.26
DDX39A-221ENST00000593026 LONP1P36776 959 aaKnown RBP16.7■□□□□ 0.26
DDX39A-221ENST00000593026 TBC1D8BQ0IIM8 1120 aa16.7■□□□□ 0.26
DDX39A-221ENST00000593026 TARBP2Q15633 366 aaKnown RBP16.7■□□□□ 0.26
DDX39A-221ENST00000593026 TRIM71Q2Q1W2 868 aaKnown RBP16.7■□□□□ 0.26
DDX39A-221ENST00000593026 PLA2G4FQ68DD2 849 aa16.7■□□□□ 0.26
DDX39A-221ENST00000593026 OTUD6AQ7L8S5 288 aa16.7■□□□□ 0.26
DDX39A-221ENST00000593026 LINC00301Q8NCQ3 95 aa16.7■□□□□ 0.26
DDX39A-221ENST00000593026 BADQ92934 168 aa16.7■□□□□ 0.26
DDX39A-221ENST00000593026 AK8Q96MA6 479 aa16.7■□□□□ 0.26
DDX39A-221ENST00000593026 PCDHA2Q9Y5H9 948 aa16.7■□□□□ 0.26
DDX39A-221ENST00000593026 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
DDX39A-221ENST00000593026 MAGEB2O15479 319 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 CAND2O75155 1236 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 CKBP12277 381 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 SELPP16109 830 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 MUTP22033 750 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 CDC25AP30304 524 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 THPOP40225 353 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 MAGEA10P43363 369 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-221ENST00000593026 CCL23P55773 120 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 MDM2Q00987 491 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-221ENST00000593026 DNM1Q05193 864 aaKnown RBP16.69■□□□□ 0.26
DDX39A-221ENST00000593026 MFSD5Q6N075 450 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 POTEGQ6S5H5 508 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 RSPH3Q86UC2 560 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 TMEM199Q8N511 208 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 CEP170P1Q96L14 293 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 CCDC43Q96MW1 224 aaKnown RBP16.69■□□□□ 0.26
DDX39A-221ENST00000593026 SH2D3AQ9BRG2 576 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 FAM49AQ9H0Q0 323 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-221ENST00000593026 WNT8AQ9H1J5 351 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 CYP26B1Q9NR63 512 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 FBXO2Q9UK22 296 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-221ENST00000593026 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 SRPRBQ9Y5M8 271 aaKnown RBP16.69■□□□□ 0.26
DDX39A-221ENST00000593026 TANC1Q9C0D5 1861 aa16.69■□□□□ 0.26
DDX39A-221ENST00000593026 SMIM35A0A1B0GVV1 85 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 ZBTB39O15060 712 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 SPTLC2O15270 562 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 RPLP2P05387 115 aaKnown RBP16.68■□□□□ 0.26
DDX39A-221ENST00000593026 NCLP19338 710 aaKnown RBP16.68■□□□□ 0.26
DDX39A-221ENST00000593026 NPEPPSP55786 919 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 GRIN1Q05586 938 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 FPGSQ05932 587 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 XKR9Q5GH70 373 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 ZNF618Q5T7W0 954 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 LRRC8DQ7L1W4 858 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 RPAINQ86UA6 219 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 METTL13Q8N6R0 699 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 KRI1Q8N9T8 703 aaKnown RBP16.68■□□□□ 0.26
DDX39A-221ENST00000593026 PIGOQ8TEQ8 1089 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 DNAJB3Q8WWF6 145 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 NACC1Q96RE7 527 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 MMTAG2Q9BU76 263 aaKnown RBP16.68■□□□□ 0.26
DDX39A-221ENST00000593026 ANKEF1Q9NU02 776 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 PPME1Q9Y570 386 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 KDM3AQ9Y4C1 1321 aa16.68■□□□□ 0.26
DDX39A-221ENST00000593026 CTSHP09668 335 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 IQCF3P0C7M6 154 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 XRCC6P12956 609 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDX39A-221ENST00000593026 CSF2RAP15509 400 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 UBA7P41226 1012 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 KRT85P78386 507 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
DDX39A-221ENST00000593026 EFCAB12Q6NXP0 572 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 CABP7Q86V35 215 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 ZNF579Q8NAF0 562 aaKnown RBP16.67■□□□□ 0.26
DDX39A-221ENST00000593026 SLC7A3Q8WY07 619 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 SCLYQ96I15 445 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 CDK5RAP3Q96JB5 506 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 CEP89Q96ST8 783 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 CSRNP2Q9H175 543 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 DDX19AQ9NUU7 478 aaKnown RBP16.67■□□□□ 0.26
DDX39A-221ENST00000593026 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-221ENST00000593026 KIAA1024Q9UPX6 916 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 ARID2Q68CP9 1835 aa16.67■□□□□ 0.26
DDX39A-221ENST00000593026 A0A087WWV3 80 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 RSPH10B2B2RC85 870 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 M0QZ92 97 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 PPP6R2O75170 966 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 RSPH10BP0C881 870 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 TMOD1P28289 359 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 RFC5P40937 340 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 RARRES1P49788 294 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 CLCN3P51790 818 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 POLGP54098 1239 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-221ENST00000593026 PPIGQ13427 754 aaKnown RBP eCLIP16.66■□□□□ 0.262e-8■■□□□ 13.3
DDX39A-221ENST00000593026 ECM1Q16610 540 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 EXOC8Q8IYI6 725 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 LRRC71Q8N4P6 559 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 KCNG4Q8TDN1 519 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 CLIC6Q96NY7 704 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 JPH2Q9BR39 696 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-221ENST00000593026 NT5C3AQ9H0P0 336 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 SUGCTQ9HAC7 445 aa16.66■□□□□ 0.26
DDX39A-221ENST00000593026 DBR1Q9UK59 544 aaKnown RBP16.66■□□□□ 0.26
DDX39A-221ENST00000593026 SLC26A4O43511 780 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 MAFO75444 373 aaPredicted RBP16.65■□□□□ 0.26
DDX39A-221ENST00000593026 PARNO95453 639 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms